RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 MYH11P35749 1972 aa24.05■■□□□ 1.44
C9orf3-222ENST00000496567 RPN1P04843 607 aaKnown RBP24.04■■□□□ 1.44
C9orf3-222ENST00000496567 SMTNP53814 917 aa24.04■■□□□ 1.44
C9orf3-222ENST00000496567 PEX3P56589 373 aa24.04■■□□□ 1.44
C9orf3-222ENST00000496567 TMEM62Q0P6H9 643 aa24.04■■□□□ 1.44
C9orf3-222ENST00000496567 HERC4Q5GLZ8 1057 aaPredicted RBP24.04■■□□□ 1.44
C9orf3-222ENST00000496567 KSR1Q8IVT5 923 aa24.04■■□□□ 1.44
C9orf3-222ENST00000496567 NLRP7Q8WX94 980 aa24.04■■□□□ 1.44
C9orf3-222ENST00000496567 NLRP4Q96MN2 994 aa24.04■■□□□ 1.44
C9orf3-222ENST00000496567 NOC4LQ9BVI4 516 aaKnown RBP24.04■■□□□ 1.44
C9orf3-222ENST00000496567 TRPV2Q9Y5S1 764 aa24.04■■□□□ 1.44
C9orf3-222ENST00000496567 GPR32O75388 356 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 SRGAP2CP0DJJ0 459 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 CAPSQ13938 189 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 KIZQ2M2Z5 673 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 RNF149Q8NC42 400 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 SLC17A8Q8NDX2 589 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 SPIRE2Q8WWL2 714 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 BSNDQ8WZ55 320 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 SMARCE1Q969G3 411 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 SYAP1Q96A49 352 aaPredicted RBP24.03■■□□□ 1.44
C9orf3-222ENST00000496567 NTPCRQ9BSD7 190 aaKnown RBP24.03■■□□□ 1.44
C9orf3-222ENST00000496567 CELF4Q9BZC1 486 aaKnown RBP24.03■■□□□ 1.44
C9orf3-222ENST00000496567 ADAMTS10Q9H324 1103 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 CDY2AQ9Y6F7 541 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 LRRIQ4A6NIV6 560 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 CCDC169A6NNP5 214 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 KLRC4O43908 158 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 TRAK2O60296 914 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 CTSHP09668 335 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 SELPP16109 830 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 NPTX2P47972 431 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 CRYBB1P53674 252 aaPredicted RBP24.03■■□□□ 1.44
C9orf3-222ENST00000496567 COASYQ13057 564 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 FAM26DQ5JW98 314 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 ZNF618Q5T7W0 954 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 GSDMAQ96QA5 445 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 PPP1R16BQ96T49 567 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 KMT5AQ9NQR1 393 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 EXOC1Q9NV70 894 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 GINS2Q9Y248 185 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 PCDHA5Q9Y5H7 936 aa24.03■■□□□ 1.44
C9orf3-222ENST00000496567 A0A087WZ62 844 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 H0YCG3 227 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 PHKA2P46019 1235 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 MGAT3Q09327 533 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 SFR1Q86XK3 245 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 FAM178BQ8IXR5 827 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 SPATA20Q8TB22 786 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 DEPTORQ8TB45 409 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 FDXACB1Q9BRP7 624 aaPredicted RBP24.02■■□□□ 1.44
C9orf3-222ENST00000496567 NFKBIZQ9BYH8 718 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 GCOM2Q9BZD3 368 aaPredicted RBP24.02■■□□□ 1.44
C9orf3-222ENST00000496567 C2orf40Q9H1Z8 148 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 PRDM5Q9NQX1 630 aaPredicted RBP24.02■■□□□ 1.44
C9orf3-222ENST00000496567 OLFML3Q9NRN5 406 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 RMND1Q9NWS8 449 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 PRKAG2Q9UGJ0 569 aa24.02■■□□□ 1.44
C9orf3-222ENST00000496567 KIAA0355O15063 1070 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 EVI5O60447 810 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 CHRNA1P02708 482 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 MAPTP10636 758 aaKnown RBP24.01■■□□□ 1.43
C9orf3-222ENST00000496567 SCP2P22307 547 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 KCNB1Q14721 858 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 KMT5BQ4FZB7 885 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 CCDC183Q5T5S1 534 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 LRRC8DQ7L1W4 858 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 ZBTB8OSQ8IWT0 167 aa24.01■■□□□ 1.43
C9orf3-222ENST00000496567 ZNF668Q96K58 619 aaPredicted RBP24.01■■□□□ 1.43
C9orf3-222ENST00000496567 INO80BQ9C086 356 aaPredicted RBP24.01■■□□□ 1.43
C9orf3-222ENST00000496567 ALPK3Q96L96 1907 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 PARNO95453 639 aaKnown RBP24■■□□□ 1.43
C9orf3-222ENST00000496567 PTENP60484 403 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 EHHADHQ08426 723 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 PSMD2Q13200 908 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 SRGAP1Q7Z6B7 1085 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 IFNLR1Q8IU57 520 aaPredicted RBP24■■□□□ 1.43
C9orf3-222ENST00000496567 DPF3Q92784 378 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 ERCC4Q92889 916 aaPredicted RBP24■■□□□ 1.43
C9orf3-222ENST00000496567 OSMRQ99650 979 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 MRPL44Q9H9J2 332 aaKnown RBP24■■□□□ 1.43
C9orf3-222ENST00000496567 IFT122Q9HBG6 1241 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 KIAA1468Q9P260 1216 aa24■■□□□ 1.43
C9orf3-222ENST00000496567 RHOBTB3O94955 611 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 EIF4BP23588 611 aaKnown RBP23.99■■□□□ 1.43
C9orf3-222ENST00000496567 ABCD1P33897 745 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 SARSP49591 514 aaKnown RBP23.99■■□□□ 1.43
C9orf3-222ENST00000496567 EFNA5P52803 228 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 NCKAP1LP55160 1127 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 FAM26FQ5R3K3 315 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 NT5DC1Q5TFE4 455 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 CDCA2Q69YH5 1023 aaPredicted RBP23.99■■□□□ 1.43
C9orf3-222ENST00000496567 CAVIN1Q6NZI2 390 aaKnown RBP23.99■■□□□ 1.43
C9orf3-222ENST00000496567 C7orf61Q8IZ16 206 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 PPP1R12CQ9BZL4 782 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 CDHR5Q9HBB8 845 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 PHLPP2Q6ZVD8 1323 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 TRIM43BA6NCK2 446 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 SLC16A4O15374 487 aa23.99■■□□□ 1.43
C9orf3-222ENST00000496567 TIMP1P01033 207 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms