RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 GUCY1B3Q02153 619 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 CTTNQ14247 550 aaKnown RBP17.56■□□□□ 0.4
HDAC4-213ENST00000496347 TCEAL5Q5H9L2 206 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 ECHDC2Q86YB7 292 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 ABI1Q8IZP0 508 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 TCP11Q8WWU5 503 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 PPP2R3CQ969Q6 453 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 PABPC5Q96DU9 382 aaKnown RBP17.56■□□□□ 0.4
HDAC4-213ENST00000496347 CCDC43Q96MW1 224 aaKnown RBP17.56■□□□□ 0.4
HDAC4-213ENST00000496347 HSD17B14Q9BPX1 270 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 FDXACB1Q9BRP7 624 aaPredicted RBP17.56■□□□□ 0.4
HDAC4-213ENST00000496347 KIF3AQ9Y496 699 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 PCDHB12Q9Y5F1 795 aa17.56■□□□□ 0.4
HDAC4-213ENST00000496347 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.55■□□□□ 0.4
HDAC4-213ENST00000496347 ITGB1P05556 798 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 MCM7P33993 719 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 TXKP42681 527 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 RAB27AP51159 221 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 UBE3AQ05086 875 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 GNL2Q13823 731 aaKnown RBP17.55■□□□□ 0.4
HDAC4-213ENST00000496347 LEXMQ3ZCV2 418 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 XKR9Q5GH70 373 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 FAM102BQ5T8I3 360 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 TPH2Q8IWU9 490 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 KLHL23Q8NBE8 558 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 MTRQ99707 1265 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 IFT122Q9HBG6 1241 aa17.55■□□□□ 0.4
HDAC4-213ENST00000496347 PIN4Q9Y237 131 aaKnown RBP17.55■□□□□ 0.4
HDAC4-213ENST00000496347 POTEMA6NI47 508 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 SLITRK3O94933 977 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 EOMESO95936 686 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 OR52Z1P0C646 297 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 SKIP12755 728 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 KCNA5P22460 613 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 PCBP1Q15365 356 aaKnown RBP eCLIP17.54■□□□□ 0.4
HDAC4-213ENST00000496347 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
HDAC4-213ENST00000496347 SRGAP1Q7Z6B7 1085 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 ZNF598Q86UK7 904 aaKnown RBP17.54■□□□□ 0.4
HDAC4-213ENST00000496347 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
HDAC4-213ENST00000496347 MRPL9Q9BYD2 267 aaKnown RBP17.54■□□□□ 0.4
HDAC4-213ENST00000496347 TMEM60Q9H2L4 133 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 ALG13Q9NP73 1137 aaKnown RBP17.54■□□□□ 0.4
HDAC4-213ENST00000496347 ANKEF1Q9NU02 776 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 AGPAT5Q9NUQ2 364 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 RNF19AQ9NV58 838 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 NOL7Q9UMY1 257 aaKnown RBP17.54■□□□□ 0.4
HDAC4-213ENST00000496347 C5orf42Q9H799 3197 aa17.54■□□□□ 0.4
HDAC4-213ENST00000496347 DGAT1O75907 488 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 ATF7P17544 494 aaPredicted RBP17.53■□□□□ 0.4
HDAC4-213ENST00000496347 FGFR4P22455 802 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 PPM1AP35813 382 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 LAMTOR4Q0VGL1 99 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 CAMK1Q14012 370 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 MXD4Q14582 209 aaPredicted RBP17.53■□□□□ 0.4
HDAC4-213ENST00000496347 PUS10Q3MIT2 529 aaKnown RBP17.53■□□□□ 0.4
HDAC4-213ENST00000496347 TTC38Q5R3I4 469 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 TWF2Q6IBS0 349 aaKnown RBP17.53■□□□□ 0.4
HDAC4-213ENST00000496347 CATSPER4Q7RTX7 472 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 FERMT3Q86UX7 667 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 KSR1Q8IVT5 923 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 COLGALT1Q8NBJ5 622 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 SPPL3Q8TCT6 385 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 PRPF31Q8WWY3 499 aaKnown RBP17.53■□□□□ 0.4
HDAC4-213ENST00000496347 TMEM143Q96AN5 459 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 CASD1Q96PB1 797 aa17.53■□□□□ 0.4
HDAC4-213ENST00000496347 FSD2A1L4K1 749 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 ASAP2O43150 1006 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 CSDE1O75534 798 aaKnown RBP17.52■□□□□ 0.4
HDAC4-213ENST00000496347 ATP2B1P20020 1258 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 U2AF2P26368 475 aaKnown RBP eCLIP17.52■□□□□ 0.4
HDAC4-213ENST00000496347 PHKA2P46019 1235 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 MCM2P49736 904 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 RARRES1P49788 294 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 CLLU1OSQ5K130 101 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 HAUS3Q68CZ6 603 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 THNSL1Q8IYQ7 743 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 RNF169Q8NCN4 708 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 ERMNQ8TAM6 284 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 CWH43Q9H720 699 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 TUFT1Q9NNX1 390 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 BMP2KQ9NSY1 1161 aaPredicted RBP17.52■□□□□ 0.4
HDAC4-213ENST00000496347 TYW1Q9NV66 732 aaKnown RBP17.52■□□□□ 0.4
HDAC4-213ENST00000496347 LZTS1Q9Y250 596 aa17.52■□□□□ 0.4
HDAC4-213ENST00000496347 CARNS1A5YM72 827 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 FGF18O76093 207 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
HDAC4-213ENST00000496347 DNAJB1P25685 340 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 TFDP1Q14186 410 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 CTC1Q2NKJ3 1217 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 RNF149Q8NC42 400 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 POF1BQ8WVV4 589 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 NECAB3Q96P71 396 aaPredicted RBP17.51■□□□□ 0.39
HDAC4-213ENST00000496347 XPNPEP1Q9NQW7 623 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 TLR9Q9NR96 1032 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 FAM105AQ9NUU6 356 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 HCSTQ9UBK5 93 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 FAM50BQ9Y247 325 aa17.51■□□□□ 0.39
HDAC4-213ENST00000496347 ZBTB39O15060 712 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms