RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 FERMT3Q86UX7 667 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 IGSF22Q8N9C0 903 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 TRAIPQ9BWF2 469 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
TRIM59-207ENST00000496222 TMEM161AQ9NX61 479 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 NOL7Q9UMY1 257 aaKnown RBP13.75□□□□□ -0.21
TRIM59-207ENST00000496222 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 PCDHB7Q9Y5E2 793 aa13.75□□□□□ -0.21
TRIM59-207ENST00000496222 MYO7AQ13402 2215 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 A0A0U1RQF3 1178 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 GTPBP6O43824 516 aaPredicted RBP13.74□□□□□ -0.21
TRIM59-207ENST00000496222 RB1P06400 928 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 ARL2P36404 184 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 GPM6BQ13491 265 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 PDIA5Q14554 519 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 ECHDC2Q86YB7 292 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 PSPC1Q8WXF1 523 aaKnown RBP13.74□□□□□ -0.21
TRIM59-207ENST00000496222 NLRP4Q96MN2 994 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 CHST12Q9NRB3 414 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.74□□□□□ -0.21
TRIM59-207ENST00000496222 BRWD1Q9NSI6 2320 aa13.74□□□□□ -0.21
TRIM59-207ENST00000496222 CUL9Q8IWT3 2517 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 DGAT1O75907 488 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 SRGAP2CP0DJJ0 459 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 FGFR1P11362 822 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
TRIM59-207ENST00000496222 CTNNB1P35222 781 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 PRPHP41219 470 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 CAMK1Q14012 370 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 PAN2Q504Q3 1202 aaKnown RBP13.73□□□□□ -0.21
TRIM59-207ENST00000496222 LARP1BQ659C4 914 aaKnown RBP13.73□□□□□ -0.21
TRIM59-207ENST00000496222 MCTP1Q6DN14 999 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 POTEGQ6S5H5 508 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 LRRC55Q6ZSA7 311 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
TRIM59-207ENST00000496222 MICALL1Q8N3F8 863 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 ASAP3Q8TDY4 903 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 TCP11Q8WWU5 503 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
TRIM59-207ENST00000496222 SCLT1Q96NL6 688 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 CASD1Q96PB1 797 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 MTRQ99707 1265 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 MMTAG2Q9BU76 263 aaKnown RBP13.73□□□□□ -0.21
TRIM59-207ENST00000496222 CWH43Q9H720 699 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 DBR1Q9UK59 544 aaKnown RBP13.73□□□□□ -0.21
TRIM59-207ENST00000496222 LRFN2Q9ULH4 789 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 RWDD3Q9Y3V2 267 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 C5orf42Q9H799 3197 aa13.73□□□□□ -0.21
TRIM59-207ENST00000496222 TBKBP1A7MCY6 615 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 GRM6O15303 877 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 ASAP2O43150 1006 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 ZSCAN20P17040 1043 aaPredicted RBP13.72□□□□□ -0.21
TRIM59-207ENST00000496222 MUTP22033 750 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 SFPQP23246 707 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRIM59-207ENST00000496222 GLRA2P23416 452 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 PTENP60484 403 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 ATP2C1P98194 919 aaPredicted RBP13.72□□□□□ -0.21
TRIM59-207ENST00000496222 POU5F1BQ06416 359 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 RILPL1Q5EBL4 403 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 CLLU1OSQ5K130 101 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 SRGAP1Q7Z6B7 1085 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 RNF149Q8NC42 400 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 P2RX5Q93086 422 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 NACC1Q96RE7 527 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 PLVAPQ9BX97 442 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 INO80BQ9C086 356 aaPredicted RBP13.72□□□□□ -0.21
TRIM59-207ENST00000496222 ATP6V0A4Q9HBG4 840 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 AGPAT5Q9NUQ2 364 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 PLAGL2Q9UPG8 496 aa13.72□□□□□ -0.21
TRIM59-207ENST00000496222 PP2D1A8MPX8 630 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 H3BQV1 296 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 LAD1O00515 517 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 ZNF623O75123 536 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 EOMESO95936 686 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 ITGB1P05556 798 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.21
TRIM59-207ENST00000496222 DNAJB1P25685 340 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 PHKA2P46019 1235 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 CAPSQ13938 189 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 MXD4Q14582 209 aaPredicted RBP13.71□□□□□ -0.21
TRIM59-207ENST00000496222 AMHR2Q16671 573 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 UBXN11Q5T124 520 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 SPPL3Q8TCT6 385 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 ATXN2LQ8WWM7 1075 aaKnown RBP13.71□□□□□ -0.21
TRIM59-207ENST00000496222 C11orf84Q9BUA3 381 aaPredicted RBP13.71□□□□□ -0.21
TRIM59-207ENST00000496222 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
TRIM59-207ENST00000496222 NFKBIZQ9BYH8 718 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 TMEM117Q9H0C3 514 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 GPRC5CQ9NQ84 441 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 TYW1Q9NV66 732 aaKnown RBP13.71□□□□□ -0.21
TRIM59-207ENST00000496222 THEGQ9P2T0 379 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 LRWD1Q9UFC0 647 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 PLXNA4Q9HCM2 1894 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 TTC28Q96AY4 2481 aa13.71□□□□□ -0.21
TRIM59-207ENST00000496222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.7□□□□□ -0.22
TRIM59-207ENST00000496222 MEIS3P2A8K0S8 358 aa13.7□□□□□ -0.22
TRIM59-207ENST00000496222 USO1O60763 962 aaKnown RBP13.7□□□□□ -0.22
TRIM59-207ENST00000496222 CDC25AP30304 524 aa13.7□□□□□ -0.22
TRIM59-207ENST00000496222 CCT6AP40227 531 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms