RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 PRPHP41219 470 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 USP17L6PQ6QN14 398 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 PPP1R13BQ96KQ4 1090 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 TRIM43BA6NCK2 446 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 TNFRSF10AO00220 468 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 CTIFO43310 598 aaKnown RBP9.39□□□□□ -0.91
VPS13B-206ENST00000496144 GHRP10912 638 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 TMEM240Q5SV17 173 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 SWSAP1Q6NVH7 229 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 STXBP4Q6ZWJ1 553 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 TRIM43Q96BQ3 446 aaPredicted RBP9.39□□□□□ -0.91
VPS13B-206ENST00000496144 RIPOR3Q96MK2 946 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 ZNF558Q96NG5 402 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 RIOX1Q9H6W3 641 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 UBN1Q9NPG3 1134 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 ARHGEF35A5YM69 484 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 RRP9O43818 475 aaKnown RBP9.39□□□□□ -0.91
VPS13B-206ENST00000496144 CCNT1O60563 726 aaKnown RBP9.39□□□□□ -0.91
VPS13B-206ENST00000496144 UBA1P22314 1058 aaKnown RBP9.39□□□□□ -0.91
VPS13B-206ENST00000496144 STRN3Q13033 797 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 ORC2Q13416 577 aaPredicted RBP9.39□□□□□ -0.91
VPS13B-206ENST00000496144 GIT2Q14161 759 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 NPAS4Q8IUM7 802 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 IQUBQ8NA54 791 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 CCDC112Q8NEF3 446 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 DEPTORQ8TB45 409 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 SECISBP2LQ93073 1101 aaKnown RBP9.39□□□□□ -0.91
VPS13B-206ENST00000496144 FAM122AQ96E09 287 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 NSUN3Q9H649 340 aaKnown RBP9.39□□□□□ -0.91
VPS13B-206ENST00000496144 COL1A2P08123 1366 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 A6NJR5 290 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 H0YCG3 227 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 ELF1P32519 619 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 CAP1Q01518 475 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 SNX17Q15036 470 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 STAMQ92783 540 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 CALML4Q96GE6 196 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 TCHPQ9BT92 498 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 MTMR10Q9NXD2 777 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 CLDND1Q9NY35 253 aa9.39□□□□□ -0.91
VPS13B-206ENST00000496144 SMTNP53814 917 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 MTERF2Q49AM1 385 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 ZNF746Q6NUN9 644 aaPredicted RBP9.38□□□□□ -0.91
VPS13B-206ENST00000496144 VSIG10LQ86VR7 867 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 TLE6Q9H808 572 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 CTNND2Q9UQB3 1225 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 A0A1B0GTH6 734 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 XPOTO43592 962 aaKnown RBP9.38□□□□□ -0.91
VPS13B-206ENST00000496144 RABGGTBP53611 331 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 NR1I3Q14994 352 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 SPATA1Q5VX52 437 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 PPFIBP1Q86W92 1011 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 ACSF2Q96CM8 615 aaPredicted RBP9.38□□□□□ -0.91
VPS13B-206ENST00000496144 DISC1Q9NRI5 854 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 RMND1Q9NWS8 449 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 LMCD1Q9NZU5 365 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 KANSL3Q9P2N6 904 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 NFE2L3Q9Y4A8 694 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 ZBTB24O43167 697 aaPredicted RBP9.38□□□□□ -0.91
VPS13B-206ENST00000496144 CASP1P29466 404 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 INF2Q27J81 1249 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 ZNF658Q5TYW1 1059 aaPredicted RBP9.38□□□□□ -0.91
VPS13B-206ENST00000496144 CDKAL1Q5VV42 579 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 E4F1Q66K89 784 aaPredicted RBP9.38□□□□□ -0.91
VPS13B-206ENST00000496144 NIPA1Q7RTP0 329 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 BLZF1Q9H2G9 400 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 ZHX3Q9H4I2 956 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 PARP2Q9UGN5 583 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 RWDD2AQ9UIY3 292 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 ESYT2A0FGR8 921 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 ASAP2O43150 1006 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 HSD17B4P51659 736 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 SAMSN1Q9NSI8 373 aaKnown RBP9.38□□□□□ -0.91
VPS13B-206ENST00000496144 INPP5FQ9Y2H2 1132 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 CDY2AQ9Y6F7 541 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 OTOFQ9HC10 1997 aa9.38□□□□□ -0.91
VPS13B-206ENST00000496144 CCP110O43303 1012 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 KIF4AO95239 1232 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 SYCP1Q15431 976 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 TMC7Q7Z402 723 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 GABBR1Q9UBS5 961 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 RPN1P04843 607 aaKnown RBP9.37□□□□□ -0.91
VPS13B-206ENST00000496144 STAT6P42226 847 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 TAPT1Q6NXT6 567 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 DTHD1Q6ZMT9 781 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 NEK9Q8TD19 979 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 DNAJB3Q8WWF6 145 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 MTRQ99707 1265 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 COLEC11Q9BWP8 271 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 GBP3Q9H0R5 595 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 RBM47A0AV96 593 aaKnown RBP9.37□□□□□ -0.91
VPS13B-206ENST00000496144 MYADML2A6NDP7 307 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 ICAM3P32942 547 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 ACTR2P61160 394 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 TSHZ1Q6ZSZ6 1077 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 APTXQ7Z2E3 356 aaKnown RBP9.37□□□□□ -0.91
VPS13B-206ENST00000496144 TMEM60Q9H2L4 133 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
VPS13B-206ENST00000496144 IPO5O00410 1097 aaKnown RBP9.37□□□□□ -0.91
VPS13B-206ENST00000496144 MYL1P05976 194 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms