RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 GDAP1L1Q96MZ0 367 aa12.05□□□□□ -0.48
CMSS1-208ENST00000496116 INTS2Q9H0H0 1204 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 PACSIN2Q9UNF0 486 aaPredicted RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 SCAF8Q9UPN6 1271 aaKnown RBP12.05□□□□□ -0.48
CMSS1-208ENST00000496116 DDX3XO00571 662 aaKnown RBP eCLIP12.04□□□□□ -0.482e-11■■■□□ 15.1
CMSS1-208ENST00000496116 KCNK3O14649 394 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 P4HA2O15460 535 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 TRIM49P0CI25 452 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 TRIM49CP0CI26 452 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 LMAN1P49257 510 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 PSMC5P62195 406 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 KRT76Q01546 638 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 MTMR2Q13614 643 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 ARHGEF16Q5VV41 709 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 SND1Q7KZF4 910 aaKnown RBP eCLIP12.04□□□□□ -0.48
CMSS1-208ENST00000496116 C12orf56Q8IXR9 622 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 C4orf19Q8IY42 314 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 RDH13Q8NBN7 331 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 TPCN2Q8NHX9 752 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 U2AF1L4Q8WU68 220 aaKnown RBP12.04□□□□□ -0.48
CMSS1-208ENST00000496116 INPP4AQ96PE3 977 aaPredicted RBP12.04□□□□□ -0.48
CMSS1-208ENST00000496116 TRERF1Q96PN7 1200 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 TAAR1Q96RJ0 339 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 RMDN3Q96TC7 470 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 ST6GALNAC4Q9H4F1 302 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 RPAP3Q9H6T3 665 aaPredicted RBP12.04□□□□□ -0.48
CMSS1-208ENST00000496116 GOLGA6BA6NDN3 693 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 WDR64B1ANS9 1081 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 RNF40O75150 1001 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 PHACTR2O75167 634 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 SYF2O95926 243 aaKnown RBP12.04□□□□□ -0.48
CMSS1-208ENST00000496116 MYCLP12524 364 aaPredicted RBP12.04□□□□□ -0.48
CMSS1-208ENST00000496116 DCAF15Q66K64 600 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 XRRA1Q6P2D8 792 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 PEX26Q7Z412 305 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 LRRC57Q8N9N7 239 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 USP38Q8NB14 1042 aa12.04□□□□□ -0.48
CMSS1-208ENST00000496116 MAPK13O15264 365 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 VAMP7P51809 220 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 GTF2BQ00403 316 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 NNTQ13423 1086 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 HAUS6Q7Z4H7 955 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 XXYLT1Q8NBI6 393 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 SLC30A5Q8TAD4 765 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 ACTRT1Q8TDG2 376 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 CAVIN3Q969G5 261 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 PDCD2LQ9BRP1 358 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 AS3MTQ9HBK9 375 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 PXMP2Q9NR77 195 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 CALCOCO1Q9P1Z2 691 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 EXOC7Q9UPT5 735 aa12.03□□□□□ -0.48
CMSS1-208ENST00000496116 ASTN2O75129 1339 aaPredicted RBP12.03□□□□□ -0.48
CMSS1-208ENST00000496116 TESPA1A2RU30 521 aaPredicted RBP12.02□□□□□ -0.48
CMSS1-208ENST00000496116 TMCO5BA8MYB1 307 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 HEXIM1O94992 359 aaKnown RBP12.02□□□□□ -0.48
CMSS1-208ENST00000496116 GGCXP38435 758 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 SMTNP53814 917 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 GALCP54803 685 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 POTEAQ6S8J7 498 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 NSMFQ6X4W1 530 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 SLFN11Q7Z7L1 901 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 DAAM2Q86T65 1068 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 GLYCTKQ8IVS8 523 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 RDM1Q8NG50 284 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 LNX1Q8TBB1 728 aaPredicted RBP12.02□□□□□ -0.48
CMSS1-208ENST00000496116 CTNNBL1Q8WYA6 563 aaPredicted RBP12.02□□□□□ -0.48
CMSS1-208ENST00000496116 KRT12Q99456 494 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 HINFPQ9BQA5 517 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 PCIF1Q9H4Z3 704 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 FAM204AQ9H8W3 233 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 GDF3Q9NR23 364 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 ANKEF1Q9NU02 776 aa12.02□□□□□ -0.48
CMSS1-208ENST00000496116 SUCLA2Q9P2R7 463 aaPredicted RBP12.02□□□□□ -0.48
CMSS1-208ENST00000496116 EMSYQ7Z589 1322 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
CMSS1-208ENST00000496116 VWA5AO00534 786 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 MAFGO15525 162 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 TMEM253P0C7T8 217 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 TNFAIP3P21580 790 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 NCKAP1LP55160 1127 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 MRPS25P82663 173 aaKnown RBP12.02□□□□□ -0.49
CMSS1-208ENST00000496116 SPP2Q13103 211 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 PAK2Q13177 524 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 DGKZQ13574 1117 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 ARHGAP44Q17R89 818 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 LEKR1Q6ZMV7 388 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 NLRX1Q86UT6 975 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 AFAP1L1Q8TED9 768 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 RFFLQ8WZ73 363 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 ZBTB9Q96C00 473 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 CALR3Q96L12 384 aaKnown RBP12.02□□□□□ -0.49
CMSS1-208ENST00000496116 RUFY1Q96T51 708 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 GPR88Q9GZN0 384 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 HSPBP1Q9NZL4 362 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 RGS17Q9UGC6 210 aaPredicted RBP12.02□□□□□ -0.49
CMSS1-208ENST00000496116 HACL1Q9UJ83 578 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 DOCK1Q14185 1865 aa12.02□□□□□ -0.49
CMSS1-208ENST00000496116 PGRMC1O00264 195 aaKnown RBP12.01□□□□□ -0.49
CMSS1-208ENST00000496116 BACH1O14867 736 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms