RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 DKC1O60832 514 aaKnown RBP eCLIP20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 MAFO75444 373 aaPredicted RBP20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 EOMESO95936 686 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 QARSP47897 775 aaKnown RBP20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 KRT17Q04695 432 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 PPP2R5CQ13362 524 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 ANKRD1Q15327 319 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 DUSP6Q16828 381 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 CLLU1OSQ5K130 101 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 PLPP4Q5VZY2 271 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 PPP4R3AQ6IN85 833 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 PIK3AP1Q6ZUJ8 805 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 ANO5Q75V66 913 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 ZNF410Q86VK4 478 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 RHPN2Q8IUC4 686 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 NAP1L4Q99733 375 aaKnown RBP20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 TCF25Q9BQ70 676 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 FDXACB1Q9BRP7 624 aaPredicted RBP20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 INO80BQ9C086 356 aaPredicted RBP20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 KCNMB3Q9NPA1 279 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 ENTPD7Q9NQZ7 604 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 CHST12Q9NRB3 414 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 VAV3Q9UKW4 847 aa20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 ARIH1Q9Y4X5 557 aaPredicted RBP20.66■□□□□ 0.9
CLCNKA-207ENST00000495784 FSCN2O14926 492 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 CCNT1O60563 726 aaKnown RBP20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 SRGAP2BP0DMP2 458 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 PBX3P40426 434 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 ANAPC15P60006 121 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 PLA2G4FQ68DD2 849 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 ZNF598Q86UK7 904 aaKnown RBP20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 HELQQ8TDG4 1101 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 WASF1Q92558 559 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 NLRP4Q96MN2 994 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 MRPL9Q9BYD2 267 aaKnown RBP20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 CYP26B1Q9NR63 512 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 GJB4Q9NTQ9 266 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 SPG21Q9NZD8 308 aa20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 ORC3Q9UBD5 711 aaPredicted RBP20.65■□□□□ 0.9
CLCNKA-207ENST00000495784 DTNBO60941 627 aa20.64■□□□□ 0.89
CLCNKA-207ENST00000495784 TWF2Q6IBS0 349 aaKnown RBP20.64■□□□□ 0.89
CLCNKA-207ENST00000495784 OXER1Q8TDS5 423 aa20.64■□□□□ 0.89
CLCNKA-207ENST00000495784 SLC7A3Q8WY07 619 aa20.64■□□□□ 0.89
CLCNKA-207ENST00000495784 NGRNQ9NPE2 291 aaKnown RBP20.64■□□□□ 0.89
CLCNKA-207ENST00000495784 PIN4Q9Y237 131 aaKnown RBP20.64■□□□□ 0.89
CLCNKA-207ENST00000495784 USP15Q9Y4E8 981 aaPredicted RBP20.64■□□□□ 0.89
CLCNKA-207ENST00000495784 TBX3O15119 743 aa20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 P4HBP07237 508 aaKnown RBP20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 ATF7P17544 494 aaPredicted RBP20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 AK2P54819 239 aa20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 RBM10P98175 930 aaKnown RBP20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 CATSPER4Q7RTX7 472 aa20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 RNF135Q8IUD6 432 aa20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 KSR1Q8IVT5 923 aa20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 CEP170P1Q96L14 293 aa20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 MUTYHQ9UIF7 546 aa20.63■□□□□ 0.89
CLCNKA-207ENST00000495784 CTDNEP1O95476 244 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 SKIP12755 728 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 PHKA2P46019 1235 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 POLGP54098 1239 aaPredicted RBP20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 NPEPPSP55786 919 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 TMC7Q7Z402 723 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 EXOC8Q8IYI6 725 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 VN1R2Q8NFZ6 395 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 TRAIPQ9BWF2 469 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 BRMS1Q9HCU9 246 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 PPP4R2Q9NY27 417 aa20.62■□□□□ 0.89
CLCNKA-207ENST00000495784 BAG4O95429 457 aaKnown RBP20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 KRT2P35908 639 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 ALDH7A1P49419 539 aaKnown RBP20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 EPHA7Q15375 998 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 NCAPH2Q6IBW4 605 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 POTEDQ86YR6 584 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 SLFN12Q8IYM2 578 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 SLC39A11Q8N1S5 342 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 NECAB1Q8N987 351 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 RSPH1Q8WYR4 309 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 HAS1Q92839 578 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 LXNQ9BS40 222 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 PPME1Q9Y570 386 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 COL4A3BPQ9Y5P4 624 aa20.61■□□□□ 0.89
CLCNKA-207ENST00000495784 C5orf42Q9H799 3197 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 HIDE1A8MVS5 230 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 RFC5P40937 340 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 TECP42680 631 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 RAB27AP51159 221 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 BCAR1P56945 870 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 LONRF3Q496Y0 759 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 HERC4Q5GLZ8 1057 aaPredicted RBP20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 GLB1LQ6UWU2 654 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 OTUD6AQ7L8S5 288 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 C4orf19Q8IY42 314 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 PSPC1Q8WXF1 523 aaKnown RBP20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 LPPQ93052 612 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 TMEM143Q96AN5 459 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 PHF7Q9BWX1 381 aaPredicted RBP20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 FAM105AQ9NUU6 356 aa20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 WRAP73Q9P2S5 460 aaPredicted RBP20.6■□□□□ 0.89
CLCNKA-207ENST00000495784 ZC3H11AO75152 810 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLCNKA-207ENST00000495784 YWHABP31946 246 aaKnown RBP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms