RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 RSPH3Q86UC2 560 aa21.52■■□□□ 1.04
ATG3-208ENST00000495756 DHX38Q92620 1227 aaKnown RBP21.52■■□□□ 1.04
ATG3-208ENST00000495756 HPS3Q969F9 1004 aa21.52■■□□□ 1.04
ATG3-208ENST00000495756 OLFML3Q9NRN5 406 aa21.52■■□□□ 1.04
ATG3-208ENST00000495756 RMND1Q9NWS8 449 aa21.52■■□□□ 1.04
ATG3-208ENST00000495756 ATP11BQ9Y2G3 1177 aa21.52■■□□□ 1.04
ATG3-208ENST00000495756 DCDC2CA8MYV0 355 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 SRGAP2CP0DJJ0 459 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 NAMPTP43490 491 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 CDC42EP1Q00587 391 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 TMEM62Q0P6H9 643 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 TRIM71Q2Q1W2 868 aaKnown RBP21.52■■□□□ 1.03
ATG3-208ENST00000495756 FAM178BQ8IXR5 827 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 SPIRE2Q8WWL2 714 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 NTPCRQ9BSD7 190 aaKnown RBP21.52■■□□□ 1.03
ATG3-208ENST00000495756 TBC1D7Q9P0N9 293 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 KCNG1Q9UIX4 513 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 MAN1B1Q9UKM7 699 aa21.52■■□□□ 1.03
ATG3-208ENST00000495756 CCDC169A6NNP5 214 aa21.51■■□□□ 1.03
ATG3-208ENST00000495756 GPC3P51654 580 aa21.51■■□□□ 1.03
ATG3-208ENST00000495756 NLRP11P59045 1033 aaKnown RBP21.51■■□□□ 1.03
ATG3-208ENST00000495756 TFDP1Q14186 410 aa21.51■■□□□ 1.03
ATG3-208ENST00000495756 FAM26FQ5R3K3 315 aa21.51■■□□□ 1.03
ATG3-208ENST00000495756 ZNF710Q8N1W2 664 aa21.51■■□□□ 1.03
ATG3-208ENST00000495756 RNF149Q8NC42 400 aa21.51■■□□□ 1.03
ATG3-208ENST00000495756 NLRP4Q96MN2 994 aa21.51■■□□□ 1.03
ATG3-208ENST00000495756 FIZ1Q96SL8 496 aa21.51■■□□□ 1.03
ATG3-208ENST00000495756 LRRIQ4A6NIV6 560 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 CAPN15O75808 1086 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 THPOP40225 353 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 SMTNP53814 917 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 FAAP100Q0VG06 881 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 PSMD2Q13200 908 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 KIZQ2M2Z5 673 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 ZNF410Q86VK4 478 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 ZNF668Q96K58 619 aaPredicted RBP21.5■■□□□ 1.03
ATG3-208ENST00000495756 PPP1R16BQ96T49 567 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 KIFC3Q9BVG8 833 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 ADAMTS10Q9H324 1103 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 MRPL44Q9H9J2 332 aaKnown RBP21.5■■□□□ 1.03
ATG3-208ENST00000495756 KMT5AQ9NQR1 393 aa21.5■■□□□ 1.03
ATG3-208ENST00000495756 ADGRA3Q8IWK6 1321 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 BIN1O00499 593 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 SLC16A4O15374 487 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 CAND2O75155 1236 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 GPR32O75388 356 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 LETM1O95202 739 aaPredicted RBP21.49■■□□□ 1.03
ATG3-208ENST00000495756 MAPTP10636 758 aaKnown RBP21.49■■□□□ 1.03
ATG3-208ENST00000495756 NMT1P30419 496 aaKnown RBP21.49■■□□□ 1.03
ATG3-208ENST00000495756 NCKAP1LP55160 1127 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 MRPS6P82932 125 aaKnown RBP21.49■■□□□ 1.03
ATG3-208ENST00000495756 POU5F1BQ06416 359 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 STK4Q13043 487 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 MORC3Q14149 939 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 SLC17A8Q8NDX2 589 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 DEPTORQ8TB45 409 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 NLRP7Q8WX94 980 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 FGFBP2Q9BYJ0 223 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 SLC39A2Q9NP94 309 aa21.49■■□□□ 1.03
ATG3-208ENST00000495756 A0A087WZ62 844 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 RBL2Q08999 1139 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 ZSCAN23Q3MJ62 389 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 CDCA2Q69YH5 1023 aaPredicted RBP21.48■■□□□ 1.03
ATG3-208ENST00000495756 ISM2Q6H9L7 571 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 ZNF720Q7Z2F6 126 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 TRIML1Q8N9V2 468 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 TMEM161BQ8NDZ6 487 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 CAGE1Q8TC20 777 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 SCLT1Q96NL6 688 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 FDXACB1Q9BRP7 624 aaPredicted RBP21.48■■□□□ 1.03
ATG3-208ENST00000495756 NFKBIZQ9BYH8 718 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 IFT122Q9HBG6 1241 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 ARHGAP28Q9P2N2 729 aa21.48■■□□□ 1.03
ATG3-208ENST00000495756 K7ENM7 598 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 M0QZ92 97 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 CTSHP09668 335 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 CKBP12277 381 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 BMP6P22004 513 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 PHKA2P46019 1235 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 CASP5P51878 434 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 PTENP60484 403 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 BFSP2Q13515 415 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 ZNF658Q5TYW1 1059 aaPredicted RBP21.47■■□□□ 1.03
ATG3-208ENST00000495756 HAUS6Q7Z4H7 955 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 CCDC155Q8N6L0 562 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 KIAA0895Q8NCT3 520 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 GLIS3Q8NEA6 775 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 CELF4Q9BZC1 486 aaKnown RBP21.47■■□□□ 1.03
ATG3-208ENST00000495756 C2orf40Q9H1Z8 148 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 ST6GALNAC4Q9H4F1 302 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 CDHR5Q9HBB8 845 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 GINS2Q9Y248 185 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 GDAQ9Y2T3 454 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 TRPV2Q9Y5S1 764 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 CDY2AQ9Y6F7 541 aa21.47■■□□□ 1.03
ATG3-208ENST00000495756 H0YCG3 227 aa21.46■■□□□ 1.03
ATG3-208ENST00000495756 GCNT3O95395 438 aa21.46■■□□□ 1.03
ATG3-208ENST00000495756 CHRNA1P02708 482 aa21.46■■□□□ 1.03
ATG3-208ENST00000495756 CLTBP09497 229 aa21.46■■□□□ 1.03
ATG3-208ENST00000495756 CRYBB1P53674 252 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms