RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 USTQ9Y2C2 406 aa19.81■□□□□ 0.76
TMEM53-209ENST00000495630 PTPRZ1P23471 2315 aaPredicted RBP19.81■□□□□ 0.76
TMEM53-209ENST00000495630 KMT2EQ8IZD2 1858 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 NT5C1B-RDH14C9J2C7 533 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 PRPF3O43395 683 aaKnown RBP19.8■□□□□ 0.76
TMEM53-209ENST00000495630 SKIP12755 728 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 SFNP31947 248 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 USP11P51784 963 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 TBC1D8BQ0IIM8 1120 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 TARBP2Q15633 366 aaKnown RBP19.8■□□□□ 0.76
TMEM53-209ENST00000495630 NLRP7Q8WX94 980 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 LENG9Q96B70 501 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 LIMD1Q9UGP4 676 aa19.8■□□□□ 0.76
TMEM53-209ENST00000495630 CTSAP10619 480 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 FGFR4P22455 802 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 PHKA2P46019 1235 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 FGD1P98174 961 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 PRKCEQ02156 737 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 RARS2Q5T160 578 aaKnown RBP19.79■□□□□ 0.76
TMEM53-209ENST00000495630 ASTLQ6HA08 431 aaPredicted RBP19.79■□□□□ 0.76
TMEM53-209ENST00000495630 KIAA1841Q6NSI8 718 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 DDX53Q86TM3 631 aaKnown RBP19.79■□□□□ 0.76
TMEM53-209ENST00000495630 TMEM105Q8N8V8 129 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 TDRD5Q8NAT2 981 aaKnown RBP19.79■□□□□ 0.76
TMEM53-209ENST00000495630 SLC22A17Q8WUG5 538 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 NIFKQ9BYG3 293 aaKnown RBP19.79■□□□□ 0.76
TMEM53-209ENST00000495630 ZBP1Q9H171 429 aa19.79■□□□□ 0.76
TMEM53-209ENST00000495630 MYH9P35579 1960 aaKnown RBP19.78■□□□□ 0.76
TMEM53-209ENST00000495630 MSH4O15457 936 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 GAS7O60861 476 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 CA8P35219 290 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 NBL1P41271 181 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 DNM2P50570 870 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 CLCN5P51795 746 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 JAK3P52333 1124 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 FOXK2Q01167 660 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 C12orf76Q8N812 135 aaPredicted RBP19.78■□□□□ 0.76
TMEM53-209ENST00000495630 CCDC136Q96JN2 1154 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 INO80BQ9C086 356 aaPredicted RBP19.78■□□□□ 0.76
TMEM53-209ENST00000495630 DBR1Q9UK59 544 aaKnown RBP19.78■□□□□ 0.76
TMEM53-209ENST00000495630 MYO10Q9HD67 2058 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 CFAP54Q96N23 3096 aa19.78■□□□□ 0.76
TMEM53-209ENST00000495630 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.77■□□□□ 0.76
TMEM53-209ENST00000495630 EDIL3O43854 480 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 CSDE1O75534 798 aaKnown RBP19.77■□□□□ 0.76
TMEM53-209ENST00000495630 GALTP07902 379 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 WEE2P0C1S8 567 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 AKAP17AQ02040 695 aaKnown RBP19.77■□□□□ 0.76
TMEM53-209ENST00000495630 UGCGQ16739 394 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 BMP2KLQ5H9B9 411 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 PPFIBP1Q86W92 1011 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 RDM1Q8NG50 284 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 SLC5A5Q92911 643 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 IGSF21Q96ID5 467 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 TEKT3Q9BXF9 490 aa19.77■□□□□ 0.76
TMEM53-209ENST00000495630 IGKV6-21A0A0C4DH24 114 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 ZNF623O75123 536 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 ZC3H11AO75152 810 aaKnown RBP eCLIP19.76■□□□□ 0.75
TMEM53-209ENST00000495630 ASGR2P07307 311 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 EPCAMP16422 314 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 SFPQP23246 707 aaKnown RBP eCLIP19.76■□□□□ 0.75
TMEM53-209ENST00000495630 DRP2Q13474 957 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 XKR3Q5GH77 459 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 NOMO2Q5JPE7 1267 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 KANK3Q6NY19 840 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 GLB1LQ6UWU2 654 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 ASCL5Q7RTU5 278 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 CCDC148Q8NFR7 591 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 UNC45AQ9H3U1 944 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 MFSD1Q9H3U5 465 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 SMOC2Q9H3U7 446 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 NRDE2Q9H7Z3 1164 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 CYP26B1Q9NR63 512 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 STK39Q9UEW8 545 aa19.76■□□□□ 0.75
TMEM53-209ENST00000495630 A0A087WZ62 844 aa19.75■□□□□ 0.75
TMEM53-209ENST00000495630 LRCH2Q5VUJ6 765 aa19.75■□□□□ 0.75
TMEM53-209ENST00000495630 TWF2Q6IBS0 349 aaKnown RBP19.75■□□□□ 0.75
TMEM53-209ENST00000495630 CABP7Q86V35 215 aa19.75■□□□□ 0.75
TMEM53-209ENST00000495630 ZNF410Q86VK4 478 aa19.75■□□□□ 0.75
TMEM53-209ENST00000495630 TMEM173Q86WV6 379 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-209ENST00000495630 FBXL16Q8N461 479 aa19.75■□□□□ 0.75
TMEM53-209ENST00000495630 AUTS2Q8WXX7 1259 aa19.75■□□□□ 0.75
TMEM53-209ENST00000495630 ACSF2Q96CM8 615 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-209ENST00000495630 CEP89Q96ST8 783 aa19.75■□□□□ 0.75
TMEM53-209ENST00000495630 FDXACB1Q9BRP7 624 aaPredicted RBP19.75■□□□□ 0.75
TMEM53-209ENST00000495630 TBC1D13Q9NVG8 400 aa19.75■□□□□ 0.75
TMEM53-209ENST00000495630 CHMP2AO43633 222 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 OFD1O75665 1012 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 PSMD10O75832 226 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 STBD1O95210 358 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 IRX6P78412 446 aaPredicted RBP19.74■□□□□ 0.75
TMEM53-209ENST00000495630 RNASELQ05823 741 aaKnown RBP19.74■□□□□ 0.75
TMEM53-209ENST00000495630 MTERF2Q49AM1 385 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 Q6ZUG5 572 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 GPR149Q86SP6 731 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 BRF1Q92994 677 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 PHKBQ93100 1093 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 PGBD4Q96DM1 585 aa19.74■□□□□ 0.75
TMEM53-209ENST00000495630 RNF26Q9BY78 433 aaPredicted RBP19.74■□□□□ 0.75
TMEM53-209ENST00000495630 FAM105AQ9NUU6 356 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms