RNA–Protein interactions for RNA: ENST00000495265.5

BRD9-212, Transcript of bromodomain containing 9, humanhuman

TSL 2

Gene BRD9, Length 2,843 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-212ENST00000495265 KLHL29Q96CT2 875 aa19.13■□□□□ 0.65
BRD9-212ENST00000495265 NAP1L3Q99457 506 aaPredicted RBP19.13■□□□□ 0.65
BRD9-212ENST00000495265 THAP2Q9H0W7 228 aa19.13■□□□□ 0.65
BRD9-212ENST00000495265 MLXIPLQ9NP71 852 aa19.13■□□□□ 0.65
BRD9-212ENST00000495265 CNOT7Q9UIV1 285 aaKnown RBP19.13■□□□□ 0.65
BRD9-212ENST00000495265 DIS3Q9Y2L1 958 aaKnown RBP19.13■□□□□ 0.65
BRD9-212ENST00000495265 PCDHB13Q9Y5F0 798 aa19.13■□□□□ 0.65
BRD9-212ENST00000495265 MEIS1O00470 390 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 RIPK2O43353 540 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 NR3C1P04150 777 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 CREB1P16220 341 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 DRG2P55039 364 aaKnown RBP19.12■□□□□ 0.65
BRD9-212ENST00000495265 GIT2Q14161 759 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 TTC27Q6P3X3 843 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 EXOC3L1Q86VI1 746 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 NLRP3Q96P20 1036 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 ANKRD2Q9GZV1 360 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 IKZF4Q9H2S9 585 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 RASAL2Q9UJF2 1139 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 HGSO14964 777 aaPredicted RBP19.12■□□□□ 0.65
BRD9-212ENST00000495265 PPP4CP60510 307 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 COPS2P61201 443 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 KCNA1Q09470 495 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 PABPC4Q13310 644 aaKnown RBP eCLIP19.12■□□□□ 0.654e-6■■■□□ 17.5
BRD9-212ENST00000495265 PPP2R5EQ16537 467 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 PALB2Q86YC2 1186 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 ZDHHC14Q8IZN3 488 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 REEP2Q9BRK0 252 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 SLC5A4Q9NY91 659 aa19.12■□□□□ 0.65
BRD9-212ENST00000495265 DDX60LQ5H9U9 1706 aaKnown RBP19.12■□□□□ 0.65
BRD9-212ENST00000495265 FOXO6A8MYZ6 492 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 ANKRD63C9JTQ0 380 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 SOX5P35711 763 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 MARCKSL1P49006 195 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 CLK2P49760 499 aaKnown RBP19.11■□□□□ 0.65
BRD9-212ENST00000495265 BNIP1Q12981 228 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 TNFAIP8L3Q5GJ75 292 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 PRELID2Q8N945 189 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 SEPT11Q9NVA2 429 aaKnown RBP19.11■□□□□ 0.65
BRD9-212ENST00000495265 PHF2O75151 1096 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 CCND1P24385 295 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 ZKSCAN8Q15776 578 aaPredicted RBP19.11■□□□□ 0.65
BRD9-212ENST00000495265 JMJD4Q9H9V9 463 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 THRAP3Q9Y2W1 955 aaKnown RBP19.11■□□□□ 0.65
BRD9-212ENST00000495265 ASTN1O14525 1302 aa19.11■□□□□ 0.65
BRD9-212ENST00000495265 RSPH10B2B2RC85 870 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 CALUO43852 315 aaPredicted RBP19.1■□□□□ 0.65
BRD9-212ENST00000495265 RSPH10BP0C881 870 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 LMNB1P20700 586 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 PEX19P40855 299 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 LONRF1Q17RB8 773 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 EPM2AIP1Q7L775 607 aaPredicted RBP19.1■□□□□ 0.65
BRD9-212ENST00000495265 CCDC25Q86WR0 208 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 MICAL1Q8TDZ2 1067 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 KRT35Q92764 455 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 KIF9Q9HAQ2 790 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 MTRF1LQ9UGC7 380 aaKnown RBP19.1■□□□□ 0.65
BRD9-212ENST00000495265 PITPNM2Q9BZ72 1349 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 PDXKO00764 312 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 BTDP43251 543 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 IRX1P78414 480 aaPredicted RBP19.1■□□□□ 0.65
BRD9-212ENST00000495265 DRAP1Q14919 205 aaPredicted RBP19.1■□□□□ 0.65
BRD9-212ENST00000495265 NUGGCQ68CJ6 796 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 TMEM109Q9BVC6 243 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 RTFDC1Q9BY42 306 aaPredicted RBP19.1■□□□□ 0.65
BRD9-212ENST00000495265 PCDHA3Q9Y5H8 950 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 IRS2Q9Y4H2 1338 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 ZNF131P52739 623 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 TTBK2Q6IQ55 1244 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 BTNL9Q6UXG8 535 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 TAOK1Q7L7X3 1001 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 ADGRF4Q8IZF3 695 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 WDR66Q8TBY9 1149 aa19.1■□□□□ 0.65
BRD9-212ENST00000495265 DOT1LQ8TEK3 1739 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 TMEM110-MUSTN1A8MSY1 372 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 SMNDC1O75940 238 aaKnown RBP eCLIP19.09■□□□□ 0.659e-7■■■■□ 19.6
BRD9-212ENST00000495265 SUN1O94901 812 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 GSTO1P78417 241 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 CDCA2Q69YH5 1023 aaPredicted RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 FITM2Q8N6M3 262 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 TBC1D16Q8TBP0 767 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 STMN4Q9H169 189 aaPredicted RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 ARHGEF3Q9NR81 526 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 DNAJC12Q9UKB3 198 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 PTPN22Q9Y2R2 807 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 ALG6Q9Y672 507 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 TMEM120BA0PK00 339 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 EME2A4GXA9 379 aaPredicted RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 EIF4E1BA6NMX2 242 aaKnown RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 SLC16A2P36021 539 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 MSH2P43246 934 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 MAP2K1Q02750 393 aaPredicted RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 MKRN4PQ13434 485 aaPredicted RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 CAPRIN2Q6IMN6 1127 aaKnown RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 CATSPER3Q86XQ3 398 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 ANKRD42Q8N9B4 389 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 ZNF483Q8TF39 744 aaPredicted RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 GPR101Q96P66 508 aaPredicted RBP19.09■□□□□ 0.65
BRD9-212ENST00000495265 SYT11Q9BT88 431 aa19.09■□□□□ 0.65
BRD9-212ENST00000495265 DDX23Q9BUQ8 820 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms