RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ATP2A2P16615 1042 aaKnown RBP13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 WDR5P61964 334 aaKnown RBP13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 NCBP1Q09161 790 aaKnown RBP13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 LRIT3Q3SXY7 679 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 RASIP1Q5U651 963 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 RINT1Q6NUQ1 792 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 SRGAP1Q7Z6B7 1085 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 FAM228AQ86W67 206 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 ZBTB8OSQ8IWT0 167 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 MYOCDQ8IZQ8 938 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 PHOSPHO2Q8TCD6 241 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 LEO1Q8WVC0 666 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 LARP4BQ92615 738 aaKnown RBP13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 RAD54LQ92698 747 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 DRC1Q96MC2 740 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 PANK2Q9BZ23 570 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 GPRC5CQ9NQ84 441 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 STK17AQ9UEE5 414 aa13.39□□□□□ -0.27
CSNK1E-213ENST00000495232 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 GLRA2P23416 452 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 POU5F1BQ06416 359 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 MCM6Q14566 821 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 C1orf186Q6ZWK4 172 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 SV2BQ7L1I2 683 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 CATSPER4Q7RTX7 472 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 GPBP1Q86WP2 473 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 PDILTQ8N807 584 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 ASAP3Q8TDY4 903 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 PYM1Q9BRP8 204 aaKnown RBP13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 RUSC1Q9BVN2 902 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 IFT122Q9HBG6 1241 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 ERVK-5Q9HDB9 667 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 KCNG1Q9UIX4 513 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 LAMA3Q16787 3333 aa13.38□□□□□ -0.27
CSNK1E-213ENST00000495232 MICAL3Q7RTP6 2002 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 TCHHQ07283 1943 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 GOLGA6L4A6NEF3 574 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 INO80B-WBP1J3KQ70 363 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 ENPP3O14638 875 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 HIP1RO75146 1068 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 ERLIN2O94905 339 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 UPP2O95045 317 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 FGFR4P22455 802 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 GUCY2CP25092 1073 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 NAMPTP43490 491 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 PTENP60484 403 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 SMAD3P84022 425 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 DMP1Q13316 513 aaPredicted RBP13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 CAPSQ13938 189 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 PCBP1Q15365 356 aaKnown RBP eCLIP13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 TCTN1Q2MV58 587 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 AXDND1Q5T1B0 1012 aaPredicted RBP13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 ADALQ6DHV7 355 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 SHC4Q6S5L8 630 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 IQUBQ8NA54 791 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 DEPTORQ8TB45 409 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 ADAM2Q99965 735 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 NFKBIZQ9BYH8 718 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 C2orf40Q9H1Z8 148 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 C17orf75Q9HAS0 396 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 POLD4Q9HCU8 107 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 BLOC1S4Q9NUP1 217 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 DACT1Q9NYF0 836 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 MSRAQ9UJ68 235 aa13.37□□□□□ -0.27
CSNK1E-213ENST00000495232 CCDC169A6NNP5 214 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 IBSPP21815 317 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 SMTNP53814 917 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 PEX3P56589 373 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 DEFB103AP81534 67 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 RAB30Q15771 203 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 TPRNQ4KMQ1 711 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 RESP18Q5W5W9 173 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 HERC6Q8IVU3 1022 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 DHX58Q96C10 678 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 IPO9Q96P70 1041 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 LRRC27Q9C0I9 530 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 TSPYL2Q9H2G4 693 aaPredicted RBP13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 CUEDC2Q9H467 287 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 CHST12Q9NRB3 414 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 RGS18Q9NS28 235 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 C1orf112Q9NSG2 853 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 LRFN2Q9ULH4 789 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 ODF2LQ9ULJ1 636 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 PIN4Q9Y237 131 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 TRIOBPQ9H2D6 2365 aa13.36□□□□□ -0.27
CSNK1E-213ENST00000495232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 SFI1A8K8P3 1242 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 GRXCR1A8MXD5 290 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 POLR2DO15514 142 aaKnown RBP13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 TLL1O43897 1013 aa13.35□□□□□ -0.27
CSNK1E-213ENST00000495232 TBCAO75347 108 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms