RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 UBAP1LF5GYI3 381 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 RIPK2O43353 540 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 RSPH10BP0C881 870 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 CTNNA2P26232 953 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 TTBK2Q6IQ55 1244 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 CRAMP1Q96RY5 1269 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 GOPCQ9HD26 462 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 GPCPD1Q9NPB8 672 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 A8MUI8 341 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 GBP2P32456 591 aaPredicted RBP16.61■□□□□ 0.25
SDF4-207ENST00000494748 MARCKSL1P49006 195 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 ADCY2Q08462 1091 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 C6orf118Q5T5N4 469 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 MFSD5Q6N075 450 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 BTNL9Q6UXG8 535 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 BZW1Q7L1Q6 419 aaKnown RBP16.61■□□□□ 0.25
SDF4-207ENST00000494748 PNMA8AQ86V59 439 aaPredicted RBP16.61■□□□□ 0.25
SDF4-207ENST00000494748 EXOC3L1Q86VI1 746 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 CRYGNQ8WXF5 182 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 P2RX7Q99572 595 aaKnown RBP16.61■□□□□ 0.25
SDF4-207ENST00000494748 THAP2Q9H0W7 228 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 TMOD4Q9NZQ9 345 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 PCYOX1Q9UHG3 505 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 TGFB1I1O43294 461 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 PHF2O75151 1096 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 FGFR4P22455 802 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 BNIP1Q12981 228 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 PPP2R5EQ16537 467 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 ASRGL1Q7L266 308 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 VPS36Q86VN1 386 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 ANKLE1Q8NAG6 615 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 TBC1D16Q8TBP0 767 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 PRCCQ92733 491 aaPredicted RBP16.61■□□□□ 0.25
SDF4-207ENST00000494748 TYW1Q9NV66 732 aaKnown RBP16.61■□□□□ 0.25
SDF4-207ENST00000494748 GGT7Q9UJ14 662 aa16.61■□□□□ 0.25
SDF4-207ENST00000494748 CYP3A7-CYP3A51PA0A087WV96 503 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 CYP3A7P24462 503 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 ZNF543Q08ER8 600 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 C10orf71Q711Q0 1435 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 SYT2Q8N9I0 419 aaPredicted RBP16.6■□□□□ 0.25
SDF4-207ENST00000494748 KRT35Q92764 455 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 TRIM6Q9C030 488 aaPredicted RBP16.6■□□□□ 0.25
SDF4-207ENST00000494748 SAMD15Q9P1V8 674 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 SKAP2O75563 359 aaPredicted RBP16.6■□□□□ 0.25
SDF4-207ENST00000494748 KRT16P08779 473 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 STAT1P42224 750 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 IFNAR2P48551 515 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 GRIK3Q13003 919 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 PRPF4BQ13523 1007 aaKnown RBP16.6■□□□□ 0.25
SDF4-207ENST00000494748 MARCH10Q8NA82 808 aaPredicted RBP16.6■□□□□ 0.25
SDF4-207ENST00000494748 ETNPPLQ8TBG4 499 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 CCHCR1Q8TD31 782 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 GPR101Q96P66 508 aaPredicted RBP16.6■□□□□ 0.25
SDF4-207ENST00000494748 MXD3Q9BW11 206 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 ZHX3Q9H4I2 956 aa16.6■□□□□ 0.25
SDF4-207ENST00000494748 FAM170AA1A519 330 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 LMNB1P20700 586 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 ABCB4P21439 1286 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 SLCO1A2P46721 670 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 NAA25Q14CX7 972 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 BARGINQ6ZT62 677 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 UHMK1Q8TAS1 419 aaKnown RBP16.59■□□□□ 0.25
SDF4-207ENST00000494748 ARHGEF3Q9NR81 526 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 SLC5A4Q9NY91 659 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 DBR1Q9UK59 544 aaKnown RBP16.59■□□□□ 0.25
SDF4-207ENST00000494748 CALUO43852 315 aaPredicted RBP16.59■□□□□ 0.25
SDF4-207ENST00000494748 NEBLO76041 1014 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 CREB1P16220 341 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 HADHBP55084 474 aaKnown RBP16.59■□□□□ 0.25
SDF4-207ENST00000494748 CCDC38Q502W7 563 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 CDCA2Q69YH5 1023 aaPredicted RBP16.59■□□□□ 0.25
SDF4-207ENST00000494748 VSTM1Q6UX27 236 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 ECT2Q9H8V3 914 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 PRKAG3Q9UGI9 489 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 IGF2BP3O00425 579 aaKnown RBP eCLIP16.59■□□□□ 0.25
SDF4-207ENST00000494748 VIMP08670 466 aaKnown RBP16.59■□□□□ 0.25
SDF4-207ENST00000494748 GABPAQ06546 454 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 CGB2Q6NT52 195 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 RSRC1Q96IZ7 334 aaKnown RBP16.59■□□□□ 0.25
SDF4-207ENST00000494748 NLRP3Q96P20 1036 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 STK33Q9BYT3 514 aa16.59■□□□□ 0.25
SDF4-207ENST00000494748 METTL14Q9HCE5 456 aaKnown RBP16.59■□□□□ 0.25
SDF4-207ENST00000494748 MEIS1O00470 390 aa16.58■□□□□ 0.25
SDF4-207ENST00000494748 CLIC2O15247 247 aa16.58■□□□□ 0.25
SDF4-207ENST00000494748 GJB6O95452 261 aa16.58■□□□□ 0.25
SDF4-207ENST00000494748 AKR1B1P15121 316 aa16.58■□□□□ 0.25
SDF4-207ENST00000494748 CCNHP51946 323 aaPredicted RBP16.58■□□□□ 0.25
SDF4-207ENST00000494748 MKRN4PQ13434 485 aaPredicted RBP16.58■□□□□ 0.25
SDF4-207ENST00000494748 DRAP1Q14919 205 aaPredicted RBP16.58■□□□□ 0.25
SDF4-207ENST00000494748 SIX1Q15475 284 aaPredicted RBP16.58■□□□□ 0.25
SDF4-207ENST00000494748 ART4Q93070 314 aa16.58■□□□□ 0.25
SDF4-207ENST00000494748 NAP1L3Q99457 506 aaPredicted RBP16.58■□□□□ 0.25
SDF4-207ENST00000494748 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.25
SDF4-207ENST00000494748 CD2APQ9Y5K6 639 aa16.58■□□□□ 0.25
SDF4-207ENST00000494748 TCRBV7S2A1N4TA0A589 114 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 PABPC4Q13310 644 aaKnown RBP eCLIP16.58■□□□□ 0.247e-7■■■■□ 19.7
SDF4-207ENST00000494748 TCERG1LQ5VWI1 586 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 AAASQ9NRG9 546 aa16.58■□□□□ 0.24
SDF4-207ENST00000494748 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms