RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 FLT3LGP49771 235 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 ZNF445P59923 1031 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 PICALMQ13492 652 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 SNW1Q13573 536 aaKnown RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 ATP2B3Q16720 1220 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 CDKAL1Q5VV42 579 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 CBLL1Q75N03 491 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 FASTKD5Q7L8L6 764 aaKnown RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 TMC3Q7Z5M5 1100 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 UBE2Q1Q7Z7E8 422 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 PLD6Q8N2A8 252 aaKnown RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 ZNF655Q8N720 491 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 DAGLBQ8NCG7 672 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 BCL7CQ8WUZ0 217 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 SGSM3Q96HU1 749 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 RCC1LQ96I51 464 aaKnown RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 FGD4Q96M96 766 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 DEFB118Q96PH6 123 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 PARK7Q99497 189 aaKnown RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 HTATIP2Q9BUP3 242 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 DUSP15Q9H1R2 295 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 CHST7Q9NS84 486 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 GFOD1Q9NXC2 390 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 ABCF2Q9UG63 623 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 STAP2Q9UGK3 403 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 PA2G4Q9UQ80 394 aaKnown RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 AFG3L2Q9Y4W6 797 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 NR2E3Q9Y5X4 410 aa6.35□□□□□ -1.39
PTCD3-219ENST00000494323 LRRFIP2Q9Y608 721 aaKnown RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 RANBP2P49792 3224 aaKnown RBP6.35□□□□□ -1.39
PTCD3-219ENST00000494323 PTPRCP08575 1304 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 A0A0G2JLL6 359 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 TRIM75PA6NK02 468 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 NOP56O00567 594 aaKnown RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 TNPO2O14787 897 aaKnown RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 FARP2O94887 1054 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 PRAMEF1O95521 474 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 SSRP1Q08945 709 aaKnown RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 TKFCQ3LXA3 575 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 POMZP3Q6PJE2 187 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 ZNF574Q6ZN55 896 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 PRRT2Q7Z6L0 340 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 HOMER1Q86YM7 354 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 SCYL3Q8IZE3 742 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 LRRC47Q8N1G4 583 aaKnown RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 ARHGEF39Q8N4T4 335 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 FIBCD1Q8N539 461 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 ANKRD13CQ8N6S4 541 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 SLC17A8Q8NDX2 589 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 BVESQ8NE79 360 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 SMCR8Q8TEV9 937 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 APPBP2Q92624 585 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 PAWRQ96IZ0 340 aaKnown RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 HSPA12BQ96MM6 686 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 DSCC1Q9BVC3 393 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 GOLGA2P5Q9HBQ8 144 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 DDX4Q9NQI0 724 aaKnown RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 LRP2BPQ9P2M1 347 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 APEX2Q9UBZ4 518 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 DENND2AQ9ULE3 1009 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 SF3B6Q9Y3B4 125 aaKnown RBP6.34□□□□□ -1.39
PTCD3-219ENST00000494323 MYH2Q9UKX2 1941 aa6.34□□□□□ -1.39
PTCD3-219ENST00000494323 MYH13Q9UKX3 1938 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 ZNF521Q96K83 1311 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 KIF16BQ96L93 1317 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 MGAMO43451 1857 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 SHISA3A0PJX4 238 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 CTNND1O60716 968 aaKnown RBP6.33□□□□□ -1.4
PTCD3-219ENST00000494323 ENTPD3O75355 529 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 GSNP06396 782 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 UBTFL1P0CB47 393 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-219ENST00000494323 BTDP43251 543 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 SPP2Q13103 211 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 PLCL1Q15111 1095 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 TREML2Q5T2D2 321 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 TMPRSS7Q7RTY8 843 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 TSPYL5Q86VY4 417 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-219ENST00000494323 ZNF513Q8N8E2 541 aaPredicted RBP6.33□□□□□ -1.4
PTCD3-219ENST00000494323 ADCY4Q8NFM4 1077 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 BRF1Q92994 677 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 PPP1R14AQ96A00 147 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 COA7Q96BR5 231 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 HRASLS5Q96KN8 279 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 IDI2Q9BXS1 227 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 HDAC8Q9BY41 377 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 PRO3102Q9H379 93 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 VAV3Q9UKW4 847 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 NOB1Q9ULX3 412 aaKnown RBP6.33□□□□□ -1.4
PTCD3-219ENST00000494323 AKT3Q9Y243 479 aa6.33□□□□□ -1.4
PTCD3-219ENST00000494323 RPAP1Q9BWH6 1393 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-219ENST00000494323 SALL1Q9NSC2 1324 aa6.32□□□□□ -1.4
PTCD3-219ENST00000494323 H3BS24 57 aa6.32□□□□□ -1.4
PTCD3-219ENST00000494323 PEX10O60683 326 aa6.32□□□□□ -1.4
PTCD3-219ENST00000494323 CIAO1O76071 339 aa6.32□□□□□ -1.4
PTCD3-219ENST00000494323 IL15P40933 162 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-219ENST00000494323 MECOMQ03112 1051 aa6.32□□□□□ -1.4
PTCD3-219ENST00000494323 PRKCQQ04759 706 aa6.32□□□□□ -1.4
PTCD3-219ENST00000494323 SLFN5Q08AF3 891 aa6.32□□□□□ -1.4
PTCD3-219ENST00000494323 TFCP2Q12800 502 aa6.32□□□□□ -1.4
PTCD3-219ENST00000494323 BNIP3Q12983 259 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms