RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 RMDN3Q96TC7 470 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 IGSF9BQ9UPX0 1349 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 RAD51CO43502 376 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 EXOC3O60645 756 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 ITGA4P13612 1032 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 GCLMP48507 274 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 PEX3P56589 373 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 SF3A3Q12874 501 aaKnown RBP eCLIP13.51□□□□□ -0.25
PHF3-205ENST00000494284 R3HDM1Q15032 1099 aaKnown RBP13.51□□□□□ -0.25
PHF3-205ENST00000494284 B3GNT9Q6UX72 402 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 FRMD5Q7Z6J6 570 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 FAM83AQ86UY5 434 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 MMGT1Q8N4V1 131 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 FAM107BQ9H098 131 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 KIF13BQ9NQT8 1826 aa13.51□□□□□ -0.25
PHF3-205ENST00000494284 MYO1CO00159 1063 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 USP8P40818 1118 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 PGM5Q15124 567 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 PHLDB3Q6NSJ2 640 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 FAM76AQ8TAV0 307 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 ZIM3Q96PE6 472 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 NACC1Q96RE7 527 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 AGO4Q9HCK5 861 aaKnown RBP13.5□□□□□ -0.25
PHF3-205ENST00000494284 TUFT1Q9NNX1 390 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
PHF3-205ENST00000494284 NAGPAQ9UK23 515 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 FRMPD4Q14CM0 1322 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 DDX3XO00571 662 aaKnown RBP eCLIP13.5□□□□□ -0.253e-11■■■■■ 28.8
PHF3-205ENST00000494284 EVI5O60447 810 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 GNA14O95837 355 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 MCM3P25205 808 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 PPP3CAQ08209 521 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 PDCLQ13371 301 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 DAAM2Q86T65 1068 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 CPNE8Q86YQ8 564 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 LNX1Q8TBB1 728 aaPredicted RBP13.5□□□□□ -0.25
PHF3-205ENST00000494284 SLC20A1Q8WUM9 679 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 CASKIN2Q8WXE0 1202 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 CCDC127Q96BQ5 260 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 CELF4Q9BZC1 486 aaKnown RBP13.5□□□□□ -0.25
PHF3-205ENST00000494284 SLC38A10Q9HBR0 1119 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 OLFML3Q9NRN5 406 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 RRP15Q9Y3B9 282 aaKnown RBP13.5□□□□□ -0.25
PHF3-205ENST00000494284 PJA2O43164 708 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 TBC1D12O60347 775 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 RARRES1P49788 294 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 PDE4CQ08493 712 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 RPS6KA1Q15418 735 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 TTMPQ5BVD1 217 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 FAM102BQ5T8I3 360 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 FAM160B2Q86V87 743 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 OLIG1Q8TAK6 271 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 ZNF526Q8TF50 670 aaPredicted RBP13.5□□□□□ -0.25
PHF3-205ENST00000494284 TAF4BQ92750 862 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 AIPL1Q9NZN9 384 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 DNAJC12Q9UKB3 198 aa13.5□□□□□ -0.25
PHF3-205ENST00000494284 TUBBP07437 444 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
PHF3-205ENST00000494284 HPDP32754 393 aaPredicted RBP13.49□□□□□ -0.25
PHF3-205ENST00000494284 CCT5P48643 541 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 FMO5P49326 533 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 ZNF211Q13398 564 aaPredicted RBP13.49□□□□□ -0.25
PHF3-205ENST00000494284 DRAP1Q14919 205 aaPredicted RBP13.49□□□□□ -0.25
PHF3-205ENST00000494284 SCARA3Q6AZY7 606 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 GBP6Q6ZN66 633 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 ARHGEF19Q8IW93 802 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 BSNDQ8WZ55 320 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 ANKRD63C9JTQ0 380 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 ATMINO43313 823 aaPredicted RBP13.49□□□□□ -0.25
PHF3-205ENST00000494284 BMT2Q1RMZ1 405 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 MEI1Q5TIA1 1274 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 LMBRD2Q68DH5 695 aaPredicted RBP13.49□□□□□ -0.25
PHF3-205ENST00000494284 SNRNP48Q6IEG0 339 aaKnown RBP13.49□□□□□ -0.25
PHF3-205ENST00000494284 AADACL2Q6P093 401 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 RNF207Q6ZRF8 634 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 MAATS1Q7Z4T9 603 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 AMACRQ9UHK6 382 aa13.49□□□□□ -0.25
PHF3-205ENST00000494284 CCDC169A6NNP5 214 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 TMEM110-MUSTN1A8MSY1 372 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 VWA5AO00534 786 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
PHF3-205ENST00000494284 AARSP49588 968 aaKnown RBP eCLIP13.48□□□□□ -0.254e-6■■■■□ 24
PHF3-205ENST00000494284 GNGT1P63211 74 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 ARHGEF16Q5VV41 709 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 PPP4R3CPQ6ZMV5 832 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 DPH5Q9H2P9 285 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 BCCIPQ9P287 314 aaKnown RBP eCLIP13.48□□□□□ -0.25
PHF3-205ENST00000494284 NR2E1Q9Y466 385 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 EMSYQ7Z589 1322 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 FOXN3O00409 490 aaPredicted RBP13.48□□□□□ -0.25
PHF3-205ENST00000494284 HSF2BPO75031 334 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 RGS20O76081 388 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 SSTR3P32745 418 aaPredicted RBP13.48□□□□□ -0.25
PHF3-205ENST00000494284 XKR9Q5GH70 373 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 CBWD2Q8IUF1 395 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 PDCD2LQ9BRP1 358 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 VPS33BQ9H267 617 aa13.48□□□□□ -0.25
PHF3-205ENST00000494284 RNF146Q9NTX7 359 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms