RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 C1orf112Q9NSG2 853 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 TYW1Q9NV66 732 aaKnown RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 SUCLA2Q9P2R7 463 aaPredicted RBP9.58□□□□□ -0.88
LRCH3-219ENST00000494069 ATG2AQ2TAZ0 1938 aa9.58□□□□□ -0.88
LRCH3-219ENST00000494069 RALGAPA2Q2PPJ7 1873 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 KIAA1671Q9BY89 1806 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 A0A087WWV3 80 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 TBX3O15119 743 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 LINC01565O15544 149 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 MAFO75444 373 aaPredicted RBP9.57□□□□□ -0.88
LRCH3-219ENST00000494069 P4HBP07237 508 aaKnown RBP9.57□□□□□ -0.88
LRCH3-219ENST00000494069 IL9P15248 144 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 ATP2B1P20020 1258 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 LTBRP36941 435 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 DLX2Q07687 328 aaPredicted RBP9.57□□□□□ -0.88
LRCH3-219ENST00000494069 COL19A1Q14993 1142 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 EPHA7Q15375 998 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 LEXMQ3ZCV2 418 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 ODR4Q5SWX8 454 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 SPOUT1Q5T280 376 aaKnown RBP9.57□□□□□ -0.88
LRCH3-219ENST00000494069 ADGRD2Q7Z7M1 963 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 ECHDC2Q86YB7 292 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 RHPN2Q8IUC4 686 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 RNF169Q8NCN4 708 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 NEK9Q8TD19 979 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 TMEM143Q96AN5 459 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 CEP170P1Q96L14 293 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 NLRP4Q96MN2 994 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 CASD1Q96PB1 797 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 LXNQ9BS40 222 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 PLVAPQ9BX97 442 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 TMEM60Q9H2L4 133 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 IGFLR1Q9H665 355 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 CWH43Q9H720 699 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 ATP6V0A4Q9HBG4 840 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 CYP26B1Q9NR63 512 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 TMEM161AQ9NX61 479 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 CLDND1Q9NY35 253 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 LIMCH1Q9UPQ0 1083 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 RWDD3Q9Y3V2 267 aa9.57□□□□□ -0.88
LRCH3-219ENST00000494069 FNDC1Q4ZHG4 1894 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 SLITRK3O94933 977 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 ZSCAN20P17040 1043 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 ATF7P17544 494 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 PBX3P40426 434 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 CLUL1Q15846 466 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 CALCRLQ16602 461 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 CTC1Q2NKJ3 1217 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 LONRF3Q496Y0 759 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 CLLU1OSQ5K130 101 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 PTCRAQ6ISU1 281 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 RBM23Q86U06 439 aaKnown RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 ZNF598Q86UK7 904 aaKnown RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 TPH2Q8IWU9 490 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 C4orf19Q8IY42 314 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 P2RX5Q93086 422 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 PABPC5Q96DU9 382 aaKnown RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 MTMR9Q96QG7 549 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 NAP1L4Q99733 375 aaKnown RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 EIF2AK1Q9BQI3 630 aaKnown RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 GCOM2Q9BZD3 368 aaPredicted RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 LMAN2LQ9H0V9 348 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 ELAC1Q9H777 363 aaKnown RBP9.56□□□□□ -0.88
LRCH3-219ENST00000494069 BRMS1Q9HCU9 246 aa9.56□□□□□ -0.88
LRCH3-219ENST00000494069 A0A0U1RQF3 1178 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 GRXCR2A6NFK2 248 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 MEIS3P2A8K0S8 358 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 PER2O15055 1255 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 BAG4O95429 457 aaKnown RBP9.55□□□□□ -0.88
LRCH3-219ENST00000494069 SRGAP2CP0DJJ0 459 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 YWHABP31946 246 aaKnown RBP9.55□□□□□ -0.88
LRCH3-219ENST00000494069 MCM7P33993 719 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 TXKP42681 527 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 DNM2P50570 870 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 ERVFC1P60507 584 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 RBM10P98175 930 aaKnown RBP9.55□□□□□ -0.88
LRCH3-219ENST00000494069 TRIM29Q14134 588 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 XKR9Q5GH70 373 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 SLFN12Q8IYM2 578 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 COLGALT1Q8NBJ5 622 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 HELQQ8TDG4 1101 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 PRPF31Q8WWY3 499 aaKnown RBP9.55□□□□□ -0.88
LRCH3-219ENST00000494069 LPPQ93052 612 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 HSD17B14Q9BPX1 270 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 TMEM117Q9H0C3 514 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 EPHX3Q9H6B9 360 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 DHX33Q9H6R0 707 aaKnown RBP9.55□□□□□ -0.88
LRCH3-219ENST00000494069 ZSWIM4Q9H7M6 989 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 TTC12Q9H892 705 aaPredicted RBP9.55□□□□□ -0.88
LRCH3-219ENST00000494069 MINDY3Q9H8M7 445 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 IFT122Q9HBG6 1241 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 PCDHA12Q9UN75 941 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 NCOR1O75376 2440 aa9.55□□□□□ -0.88
LRCH3-219ENST00000494069 BDP1A6H8Y1 2624 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 PLXNA4Q9HCM2 1894 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 POTEMA6NI47 508 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 NEMFO60524 1076 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 EIF5BO60841 1220 aaKnown RBP9.54□□□□□ -0.88
LRCH3-219ENST00000494069 TBX10O75333 385 aa9.54□□□□□ -0.88
LRCH3-219ENST00000494069 FGF18O76093 207 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms