RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 SCN10AQ9Y5Y9 1956 aa8.59□□□□□ -1.03
RBM39-238ENST00000493853 GSTTP1A0A1W2PQM5 241 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 GHRP10912 638 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 INSRRP14616 1297 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 PSMA5P28066 241 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 METAP2P50579 478 aaKnown RBP eCLIP8.58□□□□□ -1.04
RBM39-238ENST00000493853 COL9A3Q14050 684 aaPredicted RBP8.58□□□□□ -1.04
RBM39-238ENST00000493853 PTPROQ16827 1216 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 ADCK5Q3MIX3 580 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 CEP55Q53EZ4 464 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 FAM26DQ5JW98 314 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 IER5Q5VY09 327 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 MCTP2Q6DN12 878 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 BLOC1S2Q6QNY1 142 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 SPRED2Q7Z698 418 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 SKAP1Q86WV1 359 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 DNAJB3Q8WWF6 145 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 TOP1MTQ969P6 601 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 PGBD1Q96JS3 809 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 SAMD11Q96NU1 681 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 C17orf80Q9BSJ5 609 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 ANO3Q9BYT9 981 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 C6orf50Q9HD87 102 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 DNAAF2Q9NVR5 837 aaKnown RBP8.58□□□□□ -1.04
RBM39-238ENST00000493853 BARHL2Q9NY43 387 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 SCHIP1Q9P0W5 487 aaPredicted RBP8.58□□□□□ -1.04
RBM39-238ENST00000493853 TFIP11Q9UBB9 837 aaKnown RBP8.58□□□□□ -1.04
RBM39-238ENST00000493853 BRPF3Q9ULD4 1205 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 TELO2Q9Y4R8 837 aa8.58□□□□□ -1.04
RBM39-238ENST00000493853 CNTNAP5Q8WYK1 1306 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 STXBP3O00186 592 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 LPXNO60711 386 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 CHRNA1P02708 482 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 MAP2K3P46734 347 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 STAT5BP51692 787 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 KCNQ1P51787 676 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 RCAN1P53805 252 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 ACTR2P61160 394 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 ADAM17P78536 824 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 HTRA4P83105 476 aaPredicted RBP8.57□□□□□ -1.04
RBM39-238ENST00000493853 AP3B2Q13367 1082 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 GPM6BQ13491 265 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 EPC2Q52LR7 807 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 JAKMIP3Q5VZ66 844 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 FAM160B1Q5W0V3 765 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 RUFY4Q6ZNE9 571 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 EP400NLQ6ZTU2 488 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 Q6ZUG5 572 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 RPAINQ86UA6 219 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 PLA2G4DQ86XP0 818 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 FIBCD1Q8N539 461 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 IL17RAQ96F46 866 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 ABHD17AQ96GS6 310 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 JAKMIP1Q96N16 626 aaKnown RBP8.57□□□□□ -1.04
RBM39-238ENST00000493853 FAM49AQ9H0Q0 323 aaPredicted RBP8.57□□□□□ -1.04
RBM39-238ENST00000493853 ATXN7L1Q9ULK2 861 aaPredicted RBP8.57□□□□□ -1.04
RBM39-238ENST00000493853 RBM19Q9Y4C8 960 aaKnown RBP8.57□□□□□ -1.04
RBM39-238ENST00000493853 EYSQ5T1H1 3165 aa8.57□□□□□ -1.04
RBM39-238ENST00000493853 PRUNE2Q8WUY3 3088 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 DDX39AO00148 427 aaKnown RBP8.56□□□□□ -1.04
RBM39-238ENST00000493853 MEIS1O00470 390 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 REC8O95072 547 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 ARP10275 920 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 SCG2P13521 617 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 ATP4AP20648 1035 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 GNA11P29992 359 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 CDC27P30260 824 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 SREBF1P36956 1147 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 SLC26A2P50443 739 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 CLDN10P78369 228 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 MRPS6P82932 125 aaKnown RBP8.56□□□□□ -1.04
RBM39-238ENST00000493853 APOBRQ0VD83 1088 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 UBAP2LQ14157 1087 aaKnown RBP8.56□□□□□ -1.04
RBM39-238ENST00000493853 FIGNL1Q6PIW4 674 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 PLPPR4Q7Z2D5 763 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 TMEM192Q8IY95 271 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 CKAP2LQ8IYA6 745 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 CYP2W1Q8TAV3 490 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 BICD2Q8TD16 824 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 BRF1Q92994 677 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 ACDQ96AP0 544 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 AGO4Q9HCK5 861 aaKnown RBP8.56□□□□□ -1.04
RBM39-238ENST00000493853 TMEM260Q9NX78 707 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 ZDHHC3Q9NYG2 299 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 KIAA1024Q9UPX6 916 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 RWDD3Q9Y3V2 267 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 CDY2AQ9Y6F7 541 aa8.56□□□□□ -1.04
RBM39-238ENST00000493853 NFASCO94856 1347 aa8.55□□□□□ -1.04
RBM39-238ENST00000493853 CHD9Q3L8U1 2897 aa8.55□□□□□ -1.04
RBM39-238ENST00000493853 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.55□□□□□ -1.04
RBM39-238ENST00000493853 A0A1W2PNR3 127 aa8.55□□□□□ -1.04
RBM39-238ENST00000493853 MBLAC1A4D2B0 266 aaPredicted RBP8.55□□□□□ -1.04
RBM39-238ENST00000493853 H3BNC9 293 aa8.55□□□□□ -1.04
RBM39-238ENST00000493853 RNF225M0QZC1 329 aaPredicted RBP8.55□□□□□ -1.04
RBM39-238ENST00000493853 ENPP3O14638 875 aa8.55□□□□□ -1.04
RBM39-238ENST00000493853 PRPF3O43395 683 aaKnown RBP8.55□□□□□ -1.04
RBM39-238ENST00000493853 BNIP3LO60238 219 aa8.55□□□□□ -1.04
RBM39-238ENST00000493853 HBP1O60381 514 aa8.55□□□□□ -1.04
RBM39-238ENST00000493853 STAG3L1P0CL83 205 aa8.55□□□□□ -1.04
RBM39-238ENST00000493853 CPA1P15085 419 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms