RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TMPRSS11EQ9UL52 423 aa6.07□□□□□ -1.44
ITGB1-216ENST00000493758 SYNPO2Q9UMS6 1093 aa6.07□□□□□ -1.44
ITGB1-216ENST00000493758 JAG2Q9Y219 1238 aa6.07□□□□□ -1.44
ITGB1-216ENST00000493758 PCDHB6Q9Y5E3 794 aa6.07□□□□□ -1.44
ITGB1-216ENST00000493758 C1QTNF3-AMACRE9PGA6 284 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 GPR39O43194 453 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 ADCY7P51828 1080 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 KRTAP10-2P60368 255 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 STAT4Q14765 748 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 CT47A1Q5JQC4 288 aaPredicted RBP6.06□□□□□ -1.44
ITGB1-216ENST00000493758 TCTN3Q6NUS6 607 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 LIMS2Q7Z4I7 341 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 SLC41A1Q8IVJ1 513 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 ACAP3Q96P50 834 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 ORAI2Q96SN7 254 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 PTPN18Q99952 460 aa6.06□□□□□ -1.44
ITGB1-216ENST00000493758 NRP2O60462 931 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 DNAJC6O75061 913 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 ADRB1P08588 477 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 ID4P47928 161 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 SELENOPP49908 381 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 NFKB2Q00653 900 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 ICAM4Q14773 271 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 FSCN1Q16658 493 aaKnown RBP6.05□□□□□ -1.44
ITGB1-216ENST00000493758 SPATS2Q86XZ4 545 aaKnown RBP6.05□□□□□ -1.44
ITGB1-216ENST00000493758 LYSMD2Q8IV50 215 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 UBR7Q8N806 425 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 WWC2-AS2Q96NR7 200 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 LRRC37BQ96QE4 947 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 DPYSL5Q9BPU6 564 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 NOL10Q9BSC4 688 aaKnown RBP6.05□□□□□ -1.44
ITGB1-216ENST00000493758 KRTAP4-7Q9BYR0 210 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 MS4A5Q9H3V2 200 aa6.05□□□□□ -1.44
ITGB1-216ENST00000493758 C14orf93Q9H972 538 aaKnown RBP6.05□□□□□ -1.44
ITGB1-216ENST00000493758 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.05□□□□□ -1.44
ITGB1-216ENST00000493758 FSBPO95073 299 aa6.04□□□□□ -1.44
ITGB1-216ENST00000493758 ADAM17P78536 824 aa6.04□□□□□ -1.44
ITGB1-216ENST00000493758 ADAM15Q13444 863 aa6.04□□□□□ -1.44
ITGB1-216ENST00000493758 R3HDM1Q15032 1099 aaKnown RBP6.04□□□□□ -1.44
ITGB1-216ENST00000493758 RNF187Q5TA31 235 aaPredicted RBP6.04□□□□□ -1.44
ITGB1-216ENST00000493758 RNF219Q5W0B1 726 aaPredicted RBP6.04□□□□□ -1.44
ITGB1-216ENST00000493758 POLNQ7Z5Q5 900 aa6.04□□□□□ -1.44
ITGB1-216ENST00000493758 PRRT2Q7Z6L0 340 aaPredicted RBP6.04□□□□□ -1.44
ITGB1-216ENST00000493758 TAX1BP1Q86VP1 789 aa6.04□□□□□ -1.44
ITGB1-216ENST00000493758 OR14K1Q8NGZ2 314 aa6.04□□□□□ -1.44
ITGB1-216ENST00000493758 DVL3Q92997 716 aaPredicted RBP6.04□□□□□ -1.44
ITGB1-216ENST00000493758 PLA2G12BQ9BX93 195 aa6.04□□□□□ -1.44
ITGB1-216ENST00000493758 ZFR2Q9UPR6 939 aaKnown RBP6.04□□□□□ -1.44
ITGB1-216ENST00000493758 PRSS38A1L453 326 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 C2orf78A6NCI8 922 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 FOXS1O43638 330 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 CDC14BO60729 498 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 RAB11FIP3O75154 756 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 APOL3O95236 402 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 VSIG10L2P0DP72 767 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 ENPP1P22413 925 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 CANXP27824 592 aaKnown RBP6.03□□□□□ -1.44
ITGB1-216ENST00000493758 MEF2AQ02078 507 aaPredicted RBP6.03□□□□□ -1.44
ITGB1-216ENST00000493758 TCIRG1Q13488 830 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 NECAB2Q7Z6G3 386 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 GPR135Q8IZ08 494 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 OR14C36Q8NHC7 312 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 Q8TCH9 128 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 EDAQ92838 391 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 GCDHQ92947 438 aaPredicted RBP6.03□□□□□ -1.44
ITGB1-216ENST00000493758 BORCS6Q96GS4 357 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 LOXL4Q96JB6 756 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 GNRHR2Q96P88 292 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 FDXACB1Q9BRP7 624 aaPredicted RBP6.03□□□□□ -1.44
ITGB1-216ENST00000493758 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 TOPORSQ9NS56 1045 aaPredicted RBP6.03□□□□□ -1.44
ITGB1-216ENST00000493758 MCM8Q9UJA3 840 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 FAM184BQ9ULE4 1060 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 NOC2LQ9Y3T9 749 aaKnown RBP6.03□□□□□ -1.44
ITGB1-216ENST00000493758 SBNO2Q9Y2G9 1366 aa6.03□□□□□ -1.44
ITGB1-216ENST00000493758 LCHNA4D1U4 455 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 ZNF623O75123 536 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 PCDH8O95206 1070 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 JUNP05412 331 aaKnown RBP6.02□□□□□ -1.45
ITGB1-216ENST00000493758 GAAP10253 952 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 ZNF20P17024 532 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 CNGA1P29973 690 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 BUD31P41223 144 aaPredicted RBP6.02□□□□□ -1.45
ITGB1-216ENST00000493758 RIN1Q13671 783 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 SAFB2Q14151 953 aaKnown RBP eCLIP6.02□□□□□ -1.45
ITGB1-216ENST00000493758 PDCD1Q15116 288 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 PITRM1Q5JRX3 1037 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 HDGFL2Q7Z4V5 671 aaPredicted RBP6.02□□□□□ -1.45
ITGB1-216ENST00000493758 ADGRE4PQ86SQ3 457 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 GLB1L2Q8IW92 636 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 FUKQ8N0W3 1084 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 PLA2G15Q8NCC3 412 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 GIMAP8Q8ND71 665 aaPredicted RBP6.02□□□□□ -1.45
ITGB1-216ENST00000493758 SHCBP1Q8NEM2 672 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 PAWRQ96IZ0 340 aaKnown RBP6.02□□□□□ -1.45
ITGB1-216ENST00000493758 C8orf49Q96NF6 230 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 CDK5RAP1Q96SZ6 601 aaKnown RBP6.02□□□□□ -1.45
ITGB1-216ENST00000493758 PRSS50Q9UI38 385 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 DNAI1Q9UI46 699 aa6.02□□□□□ -1.45
ITGB1-216ENST00000493758 KCNG1Q9UIX4 513 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms