RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 IGLV3-22A0A075B6J6 115 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 FRMD3A2A2Y4 597 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 FAM86B1E9PN63 330 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 ATP2A1O14983 1001 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 PSMD10O75832 226 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 STAM2O75886 525 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 FLOT1O75955 427 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 CCDC175P0C221 793 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 FAM86B2P0C5J1 330 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 RPL13P26373 211 aaKnown RBP11.07□□□□□ -0.64
PRPF3-206ENST00000493553 HOXA13P31271 388 aaPredicted RBP11.07□□□□□ -0.64
PRPF3-206ENST00000493553 PRELPP51888 382 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 TUBB4BP68371 445 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 ELOAQ14241 798 aaKnown RBP11.07□□□□□ -0.64
PRPF3-206ENST00000493553 SYCP1Q15431 976 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 HERC4Q5GLZ8 1057 aaPredicted RBP11.07□□□□□ -0.64
PRPF3-206ENST00000493553 PCNX4Q63HM2 1172 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 CATSPER3Q86XQ3 398 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 TC2NQ8N9U0 490 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 SLC17A8Q8NDX2 589 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 OR8K1Q8NGG5 319 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 GOLGA5Q8TBA6 731 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 CDHR1Q96JP9 859 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 ERGIC2Q96RQ1 377 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 MAP7D2Q96T17 732 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 MXRA8Q9BRK3 442 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 ZNF577Q9BSK1 485 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 VAV3Q9UKW4 847 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 UBE4BO95155 1302 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 RPTORQ8N122 1335 aa11.07□□□□□ -0.64
PRPF3-206ENST00000493553 A0A1W2PQJ5 194 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 LGR5O75473 907 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 IPO7O95373 1038 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 CYP11B2P19099 503 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 VCAM1P19320 739 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 SLC12A3P55017 1021 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 ETF1P62495 437 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 TBC1D8BQ0IIM8 1120 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 COASYQ13057 564 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 ALCAMQ13740 583 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 COG2Q14746 738 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 ZYXQ15942 572 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 MAN2A1Q16706 1144 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 KIAA1755Q5JYT7 1200 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 ANKRD40Q6AI12 368 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 OTOP1Q7RTM1 612 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 DYMQ7RTS9 669 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 PPP1R13BQ96KQ4 1090 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 CNOT6LQ96LI5 555 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 C16orf45Q96MC5 204 aaPredicted RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 WRNIP1Q96S55 665 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 DUSP9Q99956 384 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 HSD17B14Q9BPX1 270 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 EIF2AK1Q9BQI3 630 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 NOC4LQ9BVI4 516 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 VPS16Q9H269 839 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 OLFML3Q9NRN5 406 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 ADARB2Q9NS39 739 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 TAB2Q9NYJ8 693 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 KCNG1Q9UIX4 513 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 ODF2LQ9ULJ1 636 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 CAPN11Q9UMQ6 739 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 MAPK8IP1Q9UQF2 711 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 BRCA1P38398 1863 aaKnown RBP11.06□□□□□ -0.64
PRPF3-206ENST00000493553 FRMPD4Q14CM0 1322 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 PHLPP2Q6ZVD8 1323 aa11.06□□□□□ -0.64
PRPF3-206ENST00000493553 UQCRHLA0A096LP55 91 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 B4DLN1 442 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 IPO5O00410 1097 aaKnown RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 PES1O00541 588 aaKnown RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 PDXKO00764 312 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 CETN3O15182 167 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 EIF3DO15371 548 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 CALUO43852 315 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 UQCRHP07919 91 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 SPATA31C1P0DKV0 1188 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 PTPRAP18433 802 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 SFNP31947 248 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 INPP5BP32019 993 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 ABCD1P33897 745 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 NF2P35240 595 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 COPB2P35606 906 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 JAK3P52333 1124 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 SNAP25P60880 206 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 ZBED6P86452 979 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 CDK17Q00537 523 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 RBL2Q08999 1139 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 SPP2Q13103 211 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 HSP90AA2PQ14568 343 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 HSP90AA4PQ58FG1 418 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 NBPF12Q5TAG4 269 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 ANGEL2Q5VTE6 544 aaKnown RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 E4F1Q66K89 784 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 NLRX1Q86UT6 975 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 IRF2BP1Q8IU81 584 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 FMNL3Q8IVF7 1028 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 KIAA0895Q8NCT3 520 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 ZNF507Q8TCN5 953 aa11.05□□□□□ -0.64
PRPF3-206ENST00000493553 RPAP3Q9H6T3 665 aaPredicted RBP11.05□□□□□ -0.64
PRPF3-206ENST00000493553 METTL14Q9HCE5 456 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms