RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PROB1E7EW31 1015 aa24.21■■□□□ 1.47
PFDN4-205ENST00000493356 MSH4O15457 936 aa24.21■■□□□ 1.47
PFDN4-205ENST00000493356 EDIL3O43854 480 aa24.21■■□□□ 1.47
PFDN4-205ENST00000493356 CSDE1O75534 798 aaKnown RBP24.21■■□□□ 1.47
PFDN4-205ENST00000493356 TBC1D8BQ0IIM8 1120 aa24.21■■□□□ 1.47
PFDN4-205ENST00000493356 BMS1Q14692 1282 aaKnown RBP24.21■■□□□ 1.47
PFDN4-205ENST00000493356 RARS2Q5T160 578 aaKnown RBP24.21■■□□□ 1.47
PFDN4-205ENST00000493356 TMEM173Q86WV6 379 aaPredicted RBP24.21■■□□□ 1.47
PFDN4-205ENST00000493356 VPS52Q8N1B4 723 aa24.21■■□□□ 1.47
PFDN4-205ENST00000493356 C12orf76Q8N812 135 aaPredicted RBP24.21■■□□□ 1.47
PFDN4-205ENST00000493356 TMEM105Q8N8V8 129 aa24.21■■□□□ 1.47
PFDN4-205ENST00000493356 ZBP1Q9H171 429 aa24.21■■□□□ 1.47
PFDN4-205ENST00000493356 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.2■■□□□ 1.46
PFDN4-205ENST00000493356 PRPF3O43395 683 aaKnown RBP24.2■■□□□ 1.46
PFDN4-205ENST00000493356 ASGR2P07307 311 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 HMGB1P09429 215 aaKnown RBP24.2■■□□□ 1.46
PFDN4-205ENST00000493356 FGD1P98174 961 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 DRP2Q13474 957 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 TARBP2Q15633 366 aaKnown RBP24.2■■□□□ 1.46
PFDN4-205ENST00000493356 BMP2KLQ5H9B9 411 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 KIAA1841Q6NSI8 718 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 ZDHHC14Q8IZN3 488 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 AUTS2Q8WXX7 1259 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 RIT2Q99578 217 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 DZANK1Q9NVP4 752 aa24.2■■□□□ 1.46
PFDN4-205ENST00000493356 CHMP2AO43633 222 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 GAS7O60861 476 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 ZC3H11AO75152 810 aaKnown RBP eCLIP24.19■■□□□ 1.46
PFDN4-205ENST00000493356 SFNP31947 248 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 PHKA2P46019 1235 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 KANK3Q6NY19 840 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 TDRD5Q8NAT2 981 aaKnown RBP24.19■■□□□ 1.46
PFDN4-205ENST00000493356 BICD2Q8TD16 824 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 TRAIPQ9BWF2 469 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 GCOM2Q9BZD3 368 aaPredicted RBP24.19■■□□□ 1.46
PFDN4-205ENST00000493356 CHST12Q9NRB3 414 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 IRAK3Q9Y616 596 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 DENND4AQ7Z401 1863 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 VPS13AQ96RL7 3174 aa24.19■■□□□ 1.46
PFDN4-205ENST00000493356 NID2Q14112 1375 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 CPA1P15085 419 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 EPCAMP16422 314 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 JAK3P52333 1124 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 ATAT1Q5SQI0 421 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 RSPH1Q8WYR4 309 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 SLC5A5Q92911 643 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 PHKBQ93100 1093 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 CCDC136Q96JN2 1154 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 UNC45AQ9H3U1 944 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 LIMD1Q9UGP4 676 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 USTQ9Y2C2 406 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 FAM186AA6NE01 2351 aa24.18■■□□□ 1.46
PFDN4-205ENST00000493356 CTSAP10619 480 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 POLGP54098 1239 aaPredicted RBP24.17■■□□□ 1.46
PFDN4-205ENST00000493356 LRCH2Q5VUJ6 765 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 Q6ZUG5 572 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 DDX53Q86TM3 631 aaKnown RBP24.17■■□□□ 1.46
PFDN4-205ENST00000493356 TMEM87AQ8NBN3 555 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 SLC22A17Q8WUG5 538 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 BRF1Q92994 677 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 LPPQ93052 612 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 IGSF21Q96ID5 467 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 CEP89Q96ST8 783 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 TEKT3Q9BXF9 490 aa24.17■■□□□ 1.46
PFDN4-205ENST00000493356 DBR1Q9UK59 544 aaKnown RBP24.17■■□□□ 1.46
PFDN4-205ENST00000493356 A0A087WZ62 844 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 USP11P51784 963 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 CDC42EP1Q00587 391 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 GIT2Q14161 759 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 LONRF3Q496Y0 759 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 MTERF2Q49AM1 385 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 ASTLQ6HA08 431 aaPredicted RBP24.16■■□□□ 1.46
PFDN4-205ENST00000493356 TWF2Q6IBS0 349 aaKnown RBP24.16■■□□□ 1.46
PFDN4-205ENST00000493356 ASCL5Q7RTU5 278 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 PLCD3Q8N3E9 789 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 CCDC148Q8NFR7 591 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 BCL7CQ8WUZ0 217 aaPredicted RBP24.16■■□□□ 1.46
PFDN4-205ENST00000493356 GJA10Q969M2 543 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 FDXACB1Q9BRP7 624 aaPredicted RBP24.16■■□□□ 1.46
PFDN4-205ENST00000493356 NIFKQ9BYG3 293 aaKnown RBP24.16■■□□□ 1.46
PFDN4-205ENST00000493356 NRDE2Q9H7Z3 1164 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 TBC1D13Q9NVG8 400 aa24.16■■□□□ 1.46
PFDN4-205ENST00000493356 SEPT9Q9UHD8 586 aaPredicted RBP24.16■■□□□ 1.46
PFDN4-205ENST00000493356 IGKV6-21A0A0C4DH24 114 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 CARNS1A5YM72 827 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 TMEM150BA6NC51 233 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 MEIS3P2A8K0S8 358 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 GALTP07902 379 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 SFPQP23246 707 aaKnown RBP eCLIP24.15■■□□□ 1.46
PFDN4-205ENST00000493356 NBL1P41271 181 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 AKAP17AQ02040 695 aaKnown RBP24.15■■□□□ 1.46
PFDN4-205ENST00000493356 NTRK3Q16288 839 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 GLB1LQ6UWU2 654 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 FEZF2Q8TBJ5 459 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 VPS54Q9P1Q0 977 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 DMDP11532 3685 aa24.15■■□□□ 1.46
PFDN4-205ENST00000493356 PSMD10O75832 226 aa24.14■■□□□ 1.45
PFDN4-205ENST00000493356 STBD1O95210 358 aa24.14■■□□□ 1.45
PFDN4-205ENST00000493356 SKIP12755 728 aa24.14■■□□□ 1.45
PFDN4-205ENST00000493356 XKR3Q5GH77 459 aa24.14■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms