RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 CTSAP10619 480 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 SP100P23497 879 aaPredicted RBP12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 PBX3P40426 434 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 DNM2P50570 870 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 METAP2P50579 478 aaKnown RBP eCLIP12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 RAB27AP51159 221 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 JAK3P52333 1124 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 BCAR1P56945 870 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 TBC1D8BQ0IIM8 1120 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 PRR16Q569H4 304 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 ERMP1Q7Z2K6 904 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 DDX53Q86TM3 631 aaKnown RBP12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 VPS52Q8N1B4 723 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 LRRC71Q8N4P6 559 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 HELQQ8TDG4 1101 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 NLRP7Q8WX94 980 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 NKD2Q969F2 451 aaPredicted RBP12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 RIT2Q99578 217 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 SFXN1Q9H9B4 322 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 CYP26B1Q9NR63 512 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 DISC1Q9NRI5 854 aa12.41□□□□□ -0.42
SNRNP200-207ENST00000493271 KLF18A0A0U1RQI7 1052 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 CA8P35219 290 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 PHKA2P46019 1235 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 PRKCEQ02156 737 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 COL9A3Q14050 684 aaPredicted RBP12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 RARS2Q5T160 578 aaKnown RBP12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 ELMSAN1Q6PJG2 1045 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 GLB1LQ6UWU2 654 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 C15orf39Q6ZRI6 1047 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 CCDC149Q6ZUS6 474 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 OTOP3Q7RTS5 596 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 ASCL5Q7RTU5 278 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 TRMT1LQ7Z2T5 733 aaKnown RBP12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 CABP7Q86V35 215 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 ZNF410Q86VK4 478 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 CCDC148Q8NFR7 591 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 IGSF21Q96ID5 467 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 JPH2Q9BR39 696 aaPredicted RBP12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 DPP7Q9UHL4 492 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 BRPF3Q9ULD4 1205 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 PLXNA3P51805 1871 aa12.4□□□□□ -0.42
SNRNP200-207ENST00000493271 ZNF623O75123 536 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 ZC3H11AO75152 810 aaKnown RBP eCLIP12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 AOC1P19801 751 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 USP11P51784 963 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 FGD1P98174 961 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 AKAP17AQ02040 695 aaKnown RBP12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 CYP26C1Q6V0L0 522 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 SLC22A17Q8WUG5 538 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 PGBD4Q96DM1 585 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 RTP3Q9BQQ7 232 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 EMILIN2Q9BXX0 1053 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 NIFKQ9BYG3 293 aaKnown RBP12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 C22orf23Q9BZE7 217 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 FAM217BQ9NTX9 383 aaPredicted RBP12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 LIMD1Q9UGP4 676 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 NID2Q14112 1375 aa12.39□□□□□ -0.43
SNRNP200-207ENST00000493271 PRPF3O43395 683 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 ZNF862O60290 1169 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 GAS7O60861 476 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 CDC27P30260 824 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 RNASELQ05823 741 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 TDGQ13569 410 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 NONOQ15233 471 aaKnown RBP eCLIP12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 TARBP2Q15633 366 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 XKR3Q5GH77 459 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 NOMO2Q5JPE7 1267 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 LRCH2Q5VUJ6 765 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 GPR149Q86SP6 731 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 LENG9Q96B70 501 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 TEKT3Q9BXF9 490 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 RHOBTB2Q9BYZ6 727 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 SEMA4AQ9H3S1 761 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 FAM105AQ9NUU6 356 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 TBC1D13Q9NVG8 400 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 IGSF9Q9P2J2 1179 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 DUSP12Q9UNI6 340 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
SNRNP200-207ENST00000493271 IGKV6-21A0A0C4DH24 114 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 NT5C1B-RDH14C9J2C7 533 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 MSH4O15457 936 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 ASGR2P07307 311 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 GALTP07902 379 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 EPCAMP16422 314 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 ADD1P35611 737 aaKnown RBP12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 PTPN14Q15678 1187 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 EXOC8Q8IYI6 725 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 CCDC105Q8IYK2 499 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 CMASQ8NFW8 434 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 URGCPQ8TCY9 931 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 SLC5A5Q92911 643 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 TMEM175Q9BSA9 504 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 RNF26Q9BY78 433 aaPredicted RBP12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 NRDE2Q9H7Z3 1164 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 KANSL3Q9P2N6 904 aa12.37□□□□□ -0.43
SNRNP200-207ENST00000493271 CDH22Q9UJ99 828 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms