RNA–Protein interactions for RNA: ENST00000493016.1

TSC22D1-208, Transcript of TSC22 domain family member 1, humanhuman

TSL 4

Gene TSC22D1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-208ENST00000493016 SMAD4Q13485 552 aaKnown RBP18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 PLA2G4FQ68DD2 849 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 LRRC55Q6ZSA7 311 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 RBM23Q86U06 439 aaKnown RBP18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 ZNF598Q86UK7 904 aaKnown RBP18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 RHPN2Q8IUC4 686 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 ADHFE1Q8IWW8 467 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 LRRC43Q8N309 656 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 RNF169Q8NCN4 708 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 GTF3C6Q969F1 213 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 MSLNLQ96KJ4 702 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 FDXACB1Q9BRP7 624 aaPredicted RBP18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 INO80BQ9C086 356 aaPredicted RBP18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 BRMS1Q9HCU9 246 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 CYP26B1Q9NR63 512 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 CHST12Q9NRB3 414 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 LZTS1Q9Y250 596 aa18.3■□□□□ 0.52
TSC22D1-208ENST00000493016 C19orf67A6NJJ6 358 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 SEC24BO95487 1268 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 SFPQP23246 707 aaKnown RBP eCLIP18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 NPEPPSP55786 919 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 ERVFC1P60507 584 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 PLCB3Q01970 1234 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 NR5A1Q13285 461 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 EPHA7Q15375 998 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 CLLU1OSQ5K130 101 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 PDE12Q6L8Q7 609 aaKnown RBP18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 KCNT2Q6UVM3 1135 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 POTEDQ86YR6 584 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 TLE6Q9H808 572 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 C11orf16Q9NQ32 467 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 CLEC1BQ9P126 229 aa18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 WRAP73Q9P2S5 460 aaPredicted RBP18.29■□□□□ 0.52
TSC22D1-208ENST00000493016 FAM205CA6NFA0 338 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 FSCN2O14926 492 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 BAG4O95429 457 aaKnown RBP18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 EYA4O95677 639 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 ATF7P17544 494 aaPredicted RBP18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 NEK4P51957 841 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 KSR1Q8IVT5 923 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 C4orf19Q8IY42 314 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 EXOC8Q8IYI6 725 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 SLFN12Q8IYM2 578 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 SLC7A3Q8WY07 619 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 MRPS27Q92552 414 aaKnown RBP18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 TNFRSF25Q93038 417 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 CEP170P1Q96L14 293 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 ZNF558Q96NG5 402 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 LXNQ9BS40 222 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 TRAIPQ9BWF2 469 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 PUF60Q9UHX1 559 aaKnown RBP18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 PPME1Q9Y570 386 aa18.28■□□□□ 0.52
TSC22D1-208ENST00000493016 FSD2A1L4K1 749 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 GLP2RO95838 553 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 ALADP13716 330 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 PPM1AP35813 382 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 SPIRE1Q08AE8 756 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 COASYQ13057 564 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 TWF2Q6IBS0 349 aaKnown RBP18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 NCAPH2Q6IBW4 605 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 ZNF579Q8NAF0 562 aaKnown RBP18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 SMRP1Q8NCR6 262 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 NSUN7Q8NE18 718 aaKnown RBP18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 HELQQ8TDG4 1101 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 NLRP4Q96MN2 994 aa18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 POP1Q99575 1024 aaKnown RBP18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 CDCA3Q99618 268 aaPredicted RBP18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 DHX33Q9H6R0 707 aaKnown RBP18.27■□□□□ 0.52
TSC22D1-208ENST00000493016 FAM86C2PA6NEL3 165 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 PER2O15055 1255 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 YWHABP31946 246 aaKnown RBP18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 PBX3P40426 434 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 RFC5P40937 340 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 PHKA2P46019 1235 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 POLGP54098 1239 aaPredicted RBP18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 KRT17Q04695 432 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 DUSP6Q16828 381 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 OTUD6AQ7L8S5 288 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 CATSPER4Q7RTX7 472 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 DYDC2Q96IM9 177 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 MRPL9Q9BYD2 267 aaKnown RBP18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 IFT122Q9HBG6 1241 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 SPG21Q9NZD8 308 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 RGL1Q9NZL6 768 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 BARX2Q9UMQ3 279 aaPredicted RBP18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 PIN4Q9Y237 131 aaKnown RBP18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 COL4A3BPQ9Y5P4 624 aa18.26■□□□□ 0.51
TSC22D1-208ENST00000493016 DCXO43602 365 aa18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 SKIP12755 728 aa18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 PLPP4Q5VZY2 271 aa18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 PRPF31Q8WWY3 499 aaKnown RBP18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 PSPC1Q8WXF1 523 aaKnown RBP18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 RSPH1Q8WYR4 309 aa18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 TCF25Q9BQ70 676 aa18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 ZSWIM4Q9H7M6 989 aa18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 NGRNQ9NPE2 291 aaKnown RBP18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 ENTPD7Q9NQZ7 604 aa18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 FAM105AQ9NUU6 356 aa18.25■□□□□ 0.51
TSC22D1-208ENST00000493016 BTBD18B2RXH4 712 aa18.24■□□□□ 0.51
TSC22D1-208ENST00000493016 GAS2O43903 313 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms