RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 COL1A2P08123 1366 aa15.5■□□□□ 0.07
PDZRN3-210ENST00000492909 CCDC169A6NNP5 214 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 PDXKO00764 312 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 FGFR1OPO95684 399 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 F2P00734 622 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 INHAP05111 366 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 C6orf222P0C671 652 aaPredicted RBP15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 RARBP10826 455 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 HOXD13P35453 343 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 ARL2P36404 184 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 GJA9P57773 515 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 SPAG1Q07617 926 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 PPP2R5AQ15172 486 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 SPC24Q8NBT2 197 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 SLAIN1Q8ND83 568 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 TRAPPC12Q8WVT3 735 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 TCP11Q8WWU5 503 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 BSNDQ8WZ55 320 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 SPC25Q9HBM1 224 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 KMT5AQ9NQR1 393 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 IGKV6-21A0A0C4DH24 114 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 SLC16A4O15374 487 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 ZNF75DP51815 510 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 GTF2BQ00403 316 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 FKBP3Q00688 224 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 BEX3Q00994 111 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 KCNA1Q09470 495 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 MTFR1Q15390 333 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 EDRF1Q3B7T1 1238 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 DNTTIP2Q5QJE6 756 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 MAP3K21Q5TCX8 1036 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 IER5Q5VY09 327 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 FAM114A1Q8IWE2 563 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 TNS4Q8IZW8 715 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 ANKRD20A12PQ8NF67 263 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 PRIMPOLQ96LW4 560 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 SUGCTQ9HAC7 445 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 TYW1Q9NV66 732 aaKnown RBP15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 IFNKQ9P0W0 207 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 TRAF3IP3Q9Y228 551 aa15.49■□□□□ 0.07
PDZRN3-210ENST00000492909 H0YCG3 227 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 MAGEB2O15479 319 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 CALUO43852 315 aaPredicted RBP15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 MYL3P08590 195 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 CCND3P30281 292 aaPredicted RBP15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 IGBP1P78318 339 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 IRX5P78411 483 aaPredicted RBP15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 PPFIA1Q13136 1202 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 IRF2BP1Q8IU81 584 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 TMEM161BQ8NDZ6 487 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 HVCN1Q96D96 273 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 MRFAP1L1Q96HT8 127 aa15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 UPF3AQ9H1J1 476 aaKnown RBP15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 MAGEC2Q9UBF1 373 aaPredicted RBP15.48■□□□□ 0.07
PDZRN3-210ENST00000492909 BRCA2P51587 3418 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 ZMYM2Q9UBW7 1377 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KCNJ18B7U540 433 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 CBFA2T2O43439 604 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KPNA6O60684 536 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 C22orf31O95567 290 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 SCP2P22307 547 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 GLRA2P23416 452 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 EEF1GP26641 437 aaKnown RBP15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 ABCD1P33897 745 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 NAMPTP43490 491 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 DNM2P50570 870 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 UBASH3AP57075 661 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KCNJ12Q14500 433 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 GRIK4Q16099 956 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KIAA0753Q2KHM9 967 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 TCP11X2Q5H9J9 407 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 GNASQ5JWF2 1037 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 LRRC55Q6ZSA7 311 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 HS2ST1Q7LGA3 356 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KSR1Q8IVT5 923 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 SYCP3Q8IZU3 236 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 LRRC71Q8N4P6 559 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 MYRIPQ8NFW9 859 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 ASAP3Q8TDY4 903 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 PSPC1Q8WXF1 523 aaKnown RBP15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KAT2BQ92831 832 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 EEF2KMTQ96G04 330 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 ACCSQ96QU6 501 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 CTAGE1Q96RT6 745 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KIFC3Q9BVG8 833 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KATNAL1Q9BW62 490 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 XPO4Q9C0E2 1151 aaKnown RBP15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 GBP3Q9H0R5 595 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 TMEM206Q9H813 350 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 PYCARDQ9ULZ3 195 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 DENND3A2RUS2 1198 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 KLRC1P26715 233 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 CDC25BP30305 580 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 NKX3-2P78367 333 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 DRP2Q13474 957 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 MXD4Q14582 209 aaPredicted RBP15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 MFSD10Q14728 455 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 EFCAB12Q6NXP0 572 aa15.47■□□□□ 0.07
PDZRN3-210ENST00000492909 CREBRFQ8IUR6 639 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms