RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 SPATA32Q96LK8 384 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 ADAM2Q99965 735 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 RUSC1Q9BVN2 902 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 PANK2Q9BZ23 570 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 TMX1Q9H3N1 280 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 IFT122Q9HBG6 1241 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 MSRAQ9UJ68 235 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 PCDHA7Q9UN72 937 aa15.49■□□□□ 0.07
CCM2-217ENST00000492883 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.48■□□□□ 0.07
CCM2-217ENST00000492883 LRRIQ4A6NIV6 560 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 IBSPP21815 317 aaPredicted RBP15.48■□□□□ 0.07
CCM2-217ENST00000492883 SLC12A3P55017 1021 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 POU5F1BQ06416 359 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 CAPSQ13938 189 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 PPP2R5AQ15172 486 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 FAM117BQ6P1L5 589 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 CCDC73Q6ZRK6 1079 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 C1orf186Q6ZWK4 172 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 CATSPER4Q7RTX7 472 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 TMCO2Q7Z6W1 182 aaPredicted RBP15.48■□□□□ 0.07
CCM2-217ENST00000492883 RTN4RL1Q86UN2 441 aaPredicted RBP15.48■□□□□ 0.07
CCM2-217ENST00000492883 RAD54LQ92698 747 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 KIFAP3Q92845 792 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 LRCH3Q96II8 777 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 IFT74Q96LB3 600 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 SCAND2PQ9GZW5 306 aaPredicted RBP15.48■□□□□ 0.07
CCM2-217ENST00000492883 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
CCM2-217ENST00000492883 INO80B-WBP1J3KQ70 363 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 TLL1O43897 1013 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 KRT18P05783 430 aaKnown RBP15.47■□□□□ 0.07
CCM2-217ENST00000492883 PBX2P40425 430 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 FXR1P51114 621 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCM2-217ENST00000492883 PTENP60484 403 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 NCBP1Q09161 790 aaKnown RBP15.47■□□□□ 0.07
CCM2-217ENST00000492883 RAD51AP2Q09MP3 1159 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 MCM6Q14566 821 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 RAB30Q15771 203 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 SHC4Q6S5L8 630 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 PDILTQ8N807 584 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 DEPTORQ8TB45 409 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 LEO1Q8WVC0 666 aaPredicted RBP15.47■□□□□ 0.07
CCM2-217ENST00000492883 LARP4BQ92615 738 aaKnown RBP15.47■□□□□ 0.07
CCM2-217ENST00000492883 TOP1MTQ969P6 601 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 DRC1Q96MC2 740 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 TIPINQ9BVW5 301 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 PBX4Q9BYU1 374 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 TSPYL2Q9H2G4 693 aaPredicted RBP15.47■□□□□ 0.07
CCM2-217ENST00000492883 C1orf112Q9NSG2 853 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 FAM13BQ9NYF5 915 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 KCND2Q9NZV8 630 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 STK17AQ9UEE5 414 aa15.47■□□□□ 0.07
CCM2-217ENST00000492883 CIZ1Q9ULV3 898 aaPredicted RBP15.47■□□□□ 0.07
CCM2-217ENST00000492883 TRIP12Q14669 1992 aaPredicted RBP15.47■□□□□ 0.07
CCM2-217ENST00000492883 SFI1A8K8P3 1242 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 MGEA5O60502 916 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 HIP1RO75146 1068 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 ERLIN2O94905 339 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 GJB5O95377 273 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 GUCY2CP25092 1073 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 STAT6P42226 847 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 AXDND1Q5T1B0 1012 aaPredicted RBP15.46■□□□□ 0.07
CCM2-217ENST00000492883 GPBP1Q86WP2 473 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 ZBTB8OSQ8IWT0 167 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 LRRC15Q8TF66 581 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 LINC01599Q8WXQ3 324 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 BSNDQ8WZ55 320 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 MINDY3Q9H8M7 445 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 CHST12Q9NRB3 414 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 RGS18Q9NS28 235 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 LRFN2Q9ULH4 789 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 PIN4Q9Y237 131 aaKnown RBP15.46■□□□□ 0.07
CCM2-217ENST00000492883 PCDHB7Q9Y5E2 793 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 PCDHA11Q9Y5I1 949 aa15.46■□□□□ 0.07
CCM2-217ENST00000492883 MYH9P35579 1960 aaKnown RBP15.45■□□□□ 0.06
CCM2-217ENST00000492883 NPHP3-ACAD11A0A0J9YXS1 232 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 CCDC169A6NNP5 214 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 STAG3L1P0CL83 205 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 MYOGP15173 224 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 DNAJB2P25686 324 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 NAMPTP43490 491 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 PEX3P56589 373 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 DSC3Q14574 896 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 SLC24A5Q71RS6 500 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 SV2BQ7L1I2 683 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 IFNLR1Q8IU57 520 aaPredicted RBP15.45■□□□□ 0.06
CCM2-217ENST00000492883 TIFAQ96CG3 184 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 RAD9AQ99638 391 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 NFKBIZQ9BYH8 718 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 C2orf40Q9H1Z8 148 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
CCM2-217ENST00000492883 DACT1Q9NYF0 836 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 KCNG1Q9UIX4 513 aa15.45■□□□□ 0.06
CCM2-217ENST00000492883 RBM19Q9Y4C8 960 aaKnown RBP15.45■□□□□ 0.06
CCM2-217ENST00000492883 KAT6AQ92794 2004 aa15.44■□□□□ 0.06
CCM2-217ENST00000492883 TANC1Q9C0D5 1861 aa15.44■□□□□ 0.06
CCM2-217ENST00000492883 A0A087X0B3 334 aa15.44■□□□□ 0.06
CCM2-217ENST00000492883 LIG1P18858 919 aa15.44■□□□□ 0.06
CCM2-217ENST00000492883 SARSP49591 514 aaKnown RBP15.44■□□□□ 0.06
CCM2-217ENST00000492883 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
CCM2-217ENST00000492883 MBTD1Q05BQ5 628 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms