RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	DPP7	Q9UHL4	492 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	ST3GAL5	Q9UNP4	418 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	GREB1	Q4ZG55	1949 aa		6.24	□□□□□ -1.41
SEC13-219	ENST00000492602	KAT6A	Q92794	2004 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	LAMA4	Q16363	1823 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	DOCK8	Q8NF50	2099 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	SHISA7	A6NL88	538 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	TK2	O00142	265 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	GPR182	O15218	404 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	LILRB3	O75022	631 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	ZC3H11A	O75152	810 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	PDHB	P11177	359 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	FSHR	P23945	695 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	CCND2	P30279	289 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	TCF7	P36402	384 aa	Predicted RBP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	CDC37	Q16543	378 aa	Predicted RBP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	ODR4	Q5SWX8	454 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	ZSCAN25	Q6NSZ9	544 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	FAM43B	Q6ZT52	329 aa	Predicted RBP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	MTSS1L	Q765P7	747 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	IL31RA	Q8NI17	732 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	HELQ	Q8TDG4	1101 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	TMEM40	Q8WWA1	233 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	ZNF707	Q96C28	371 aa	Predicted RBP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	CRELD1	Q96HD1	420 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	IGSF21	Q96ID5	467 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	KXD1	Q9BQD3	176 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	PHF20	Q9BVI0	1012 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	UBA5	Q9GZZ9	404 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	ADAMTS10	Q9H324	1103 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	CPVL	Q9H3G5	476 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	CCDC86	Q9H6F5	360 aa	Known RBP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	ERAP1	Q9NZ08	941 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	RAX	Q9Y2V3	346 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	MRPL11	Q9Y3B7	192 aa	Known RBP	6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	PCDHA1	Q9Y5I3	950 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	KDM3A	Q9Y4C1	1321 aa		6.23	□□□□□ -1.41
SEC13-219	ENST00000492602	TEP1	Q99973	2627 aa	Known RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	RRN3P2	A6NIE6	340 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	MAN2B1	O00754	1011 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	C2CD2L	O14523	706 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	IPO8	O15397	1037 aa	Known RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	RANBP6	O60518	1105 aa	Known RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	KRT38	O76015	456 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	GLUD1	P00367	558 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	SPATA31D3	P0C874	917 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	GOLGA8H	P0CJ92	632 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	TOP1	P11387	765 aa	Known RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	INSRR	P14616	1297 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	RDX	P35241	583 aa	Known RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	RAP1GAP	P47736	663 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	PPARA	Q07869	468 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	ZNF543	Q08ER8	600 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	GAS6	Q14393	721 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	UAP1L1	Q3KQV9	507 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	GNPTAB	Q3T906	1256 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	CLLU1OS	Q5K130	101 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	SPATA31D4	Q6ZUB0	917 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	CACNA2D4	Q7Z3S7	1137 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	KBTBD6	Q86V97	674 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	ERC1	Q8IUD2	1116 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	TRMT2A	Q8IZ69	625 aa	Known RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	IFNL3	Q8IZI9	196 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	NME8	Q8N427	588 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	ZNF843	Q8N446	348 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	CHCHD4	Q8N4Q1	142 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	BCL7C	Q8WUZ0	217 aa	Predicted RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	TMEM47	Q9BQJ4	181 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	MRPL9	Q9BYD2	267 aa	Known RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	NT5C3A	Q9H0P0	336 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	C1orf115	Q9H7X2	142 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	CDHR5	Q9HBB8	845 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	SCUBE2	Q9NQ36	999 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	MRPL17	Q9NRX2	175 aa	Known RBP	6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	CDH7	Q9ULB5	785 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	EXOC6B	Q9Y2D4	811 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	PCDHGA5	Q9Y5G8	931 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	PCDHA2	Q9Y5H9	948 aa		6.22	□□□□□ -1.41
SEC13-219	ENST00000492602	MYH7	P12883	1935 aa		6.21	□□□□□ -1.41
SEC13-219	ENST00000492602	MYH15	Q9Y2K3	1946 aa		6.21	□□□□□ -1.41
SEC13-219	ENST00000492602	SPAAR	A0A1B0GVQ0	90 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	SMIM35	A0A1B0GVV1	85 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	FAM221B	A6H8Z2	402 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	SPATA31C2	B4DYI2	1134 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	PATL2	C9JE40	543 aa	Known RBP	6.21	□□□□□ -1.42
SEC13-219	ENST00000492602		K7ESF4	209 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	GPAA1	O43292	621 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	RPP40	O75818	363 aa	Known RBP	6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	NTRK1	P04629	796 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	ADH1A	P07327	375 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	IFIT2	P09913	472 aa	Known RBP	6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	CCDC192	P0DO97	292 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	ZSCAN20	P17040	1043 aa	Predicted RBP	6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	GNAT2	P19087	354 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	HOXA13	P31271	388 aa	Predicted RBP	6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	HOXC13	P31276	330 aa		6.21	□□□□□ -1.42
SEC13-219	ENST00000492602	NOV	P48745	357 aa		6.21	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms