RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 S1PR4O95977 384 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 MCM5P33992 734 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 FAM189BP81408 668 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 KCNC3Q14003 757 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 GIT2Q14161 759 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 ZDHHC14Q8IZN3 488 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 ADSSL1Q8N142 457 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 CCDC82Q8N4S0 544 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 SRBD1Q8N5C6 995 aaKnown RBP11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 RNF169Q8NCN4 708 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 FLCNQ8NFG4 579 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 KCNG4Q8TDN1 519 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 TMEM169Q96HH4 297 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 TMEM87BQ96K49 555 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 MAP7D2Q96T17 732 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 OSMRQ99650 979 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 MYL10Q9BUA6 226 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 GLT8D2Q9H1C3 349 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 CWH43Q9H720 699 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 ZNF302Q9NR11 478 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 DZANK1Q9NVP4 752 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 LIMD1Q9UGP4 676 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 CEP131Q9UPN4 1083 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 USTQ9Y2C2 406 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 HCFC2Q9Y5Z7 792 aa11.07□□□□□ -0.64
TNFRSF9-203ENST00000492571 MAGEB2O15479 319 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 PRC1O43663 620 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 ATG7O95352 703 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 CXCL14O95715 111 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 RFX1P22670 979 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 NAPAP54920 295 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 SWSAP1Q6NVH7 229 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 FRMD5Q7Z6J6 570 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 CMTR1Q8N1G2 835 aaKnown RBP11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 TMEM105Q8N8V8 129 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 RSPH1Q8WYR4 309 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 SCLT1Q96NL6 688 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 PPP1R16BQ96T49 567 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 MRPL9Q9BYD2 267 aaKnown RBP11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 POMKQ9H5K3 350 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 LY9Q9HBG7 655 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 AGO4Q9HCK5 861 aaKnown RBP11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 FBXL21Q9UKT6 434 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 AKT3Q9Y243 479 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 KAT6AQ92794 2004 aa11.06□□□□□ -0.64
TNFRSF9-203ENST00000492571 CACNA1HO95180 2353 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 DDX39AO00148 427 aaKnown RBP11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 PLEKHA8P1O95397 391 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 EOMESO95936 686 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 ARP10275 920 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 RARS2Q5T160 578 aaKnown RBP11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 ABHD15Q6UXT9 468 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 OTOP3Q7RTS5 596 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 TRMT1LQ7Z2T5 733 aaKnown RBP11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 CABP7Q86V35 215 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 FAM228AQ86W67 206 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 PPFIBP1Q86W92 1011 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 FANCBQ8NB91 859 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 CYP2W1Q8TAV3 490 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 TMEM40Q8WWA1 233 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 CASD1Q96PB1 797 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 RTP3Q9BQQ7 232 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 SEMA4AQ9H3S1 761 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 CYP26B1Q9NR63 512 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 DACT1Q9NYF0 836 aa11.05□□□□□ -0.64
TNFRSF9-203ENST00000492571 IGKV6D-21A0A0A0MT36 114 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 hCG_1642624A0A1W2PR95 340 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 C2orf71A6NGG8 1288 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 MEIS1O00470 390 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 CLASP2O75122 1294 aaKnown RBP11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 VTNP04004 478 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 ASGR2P07307 311 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 EIF4BP23588 611 aaKnown RBP11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 PBX3P40426 434 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 LIFRP42702 1097 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 ADCY7P51828 1080 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 NLRP11P59045 1033 aaKnown RBP11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 CDC42EP1Q00587 391 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 PTH1RQ03431 593 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 AP3B2Q13367 1082 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 NONOQ15233 471 aaKnown RBP eCLIP11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 KIAA1841Q6NSI8 718 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 ELMSAN1Q6PJG2 1045 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 LRRC55Q6ZSA7 311 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 NIPA1Q7RTP0 329 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 ECHDC2Q86YB7 292 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 MB21D2Q8IYB1 491 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 VPS52Q8N1B4 723 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 FAM167AQ96KS9 214 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 RIC8AQ9NPQ8 531 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 NRBP2Q9NSY0 501 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 STK39Q9UEW8 545 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 SAMM50Q9Y512 469 aa11.04□□□□□ -0.64
TNFRSF9-203ENST00000492571 A0A0U1RQF3 1178 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 hCG_1984214I3L0E3 225 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 IPO5O00410 1097 aaKnown RBP11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 ADH1BP00325 375 aa11.03□□□□□ -0.64
TNFRSF9-203ENST00000492571 IGHDP01880 384 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms