RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 BARHL2Q9NY43 387 aa15.52■□□□□ 0.08
GPNMB-213ENST00000492512 FBXL21Q9UKT6 434 aa15.52■□□□□ 0.08
GPNMB-213ENST00000492512 IRAK3Q9Y616 596 aa15.52■□□□□ 0.08
GPNMB-213ENST00000492512 V9GY48 417 aaPredicted RBP15.52■□□□□ 0.08
GPNMB-213ENST00000492512 C2orf16Q68DN1 1984 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 CARNS1A5YM72 827 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 SLC27A2O14975 620 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 PI15O43692 258 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 CYP3A4P08684 503 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 CTSAP10619 480 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 DARSP14868 501 aaKnown RBP15.51■□□□□ 0.07
GPNMB-213ENST00000492512 FGFR4P22455 802 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 GPC3P51654 580 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 SETQ01105 290 aaPredicted RBP15.51■□□□□ 0.07
GPNMB-213ENST00000492512 TDGQ13569 410 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 ANGPT1Q15389 498 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 APOA5Q6Q788 366 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 CCDC149Q6ZUS6 474 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 OTOP3Q7RTS5 596 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 LINC01465Q8N7H1 131 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 SLC22A17Q8WUG5 538 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 NLRP7Q8WX94 980 aa15.51■□□□□ 0.07
GPNMB-213ENST00000492512 NPR3P17342 541 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 FUT2Q10981 343 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 RTN1Q16799 776 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 GPR149Q86SP6 731 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 DDX53Q86TM3 631 aaKnown RBP15.5■□□□□ 0.07
GPNMB-213ENST00000492512 PPFIBP1Q86W92 1011 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 TMEM173Q86WV6 379 aaPredicted RBP15.5■□□□□ 0.07
GPNMB-213ENST00000492512 SIX5Q8N196 739 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 DTWD2Q8NBA8 298 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 RSPH1Q8WYR4 309 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 IGSF21Q96ID5 467 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 SFXN1Q9H9B4 322 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 NRBP2Q9NSY0 501 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 DUSP12Q9UNI6 340 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 FRYLO94915 3013 aa15.5■□□□□ 0.07
GPNMB-213ENST00000492512 CSDE1O75534 798 aaKnown RBP15.49■□□□□ 0.07
GPNMB-213ENST00000492512 OATP04181 439 aa15.49■□□□□ 0.07
GPNMB-213ENST00000492512 RNASELQ05823 741 aaKnown RBP15.49■□□□□ 0.07
GPNMB-213ENST00000492512 CREB3L3Q68CJ9 461 aa15.49■□□□□ 0.07
GPNMB-213ENST00000492512 KCNG4Q8TDN1 519 aa15.49■□□□□ 0.07
GPNMB-213ENST00000492512 CRYGNQ8WXF5 182 aa15.49■□□□□ 0.07
GPNMB-213ENST00000492512 LSG1Q9H089 658 aaKnown RBP15.49■□□□□ 0.07
GPNMB-213ENST00000492512 KCNK12Q9HB15 430 aa15.49■□□□□ 0.07
GPNMB-213ENST00000492512 CHST12Q9NRB3 414 aa15.49■□□□□ 0.07
GPNMB-213ENST00000492512 WDR64B1ANS9 1081 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 STK25O00506 426 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 ZBTB43O43298 467 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 GALTP07902 379 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 PHKA2P46019 1235 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 PRKCEQ02156 737 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 TBC1D8BQ0IIM8 1120 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 LONRF3Q496Y0 759 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 PRR16Q569H4 304 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 TWF2Q6IBS0 349 aaKnown RBP15.48■□□□□ 0.07
GPNMB-213ENST00000492512 GLB1LQ6UWU2 654 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 FEZF2Q8TBJ5 459 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 LPPQ93052 612 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 GCOM2Q9BZD3 368 aaPredicted RBP15.48■□□□□ 0.07
GPNMB-213ENST00000492512 GBP3Q9H0R5 595 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 NRDE2Q9H7Z3 1164 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 TBC1D13Q9NVG8 400 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 INPP5FQ9Y2H2 1132 aa15.48■□□□□ 0.07
GPNMB-213ENST00000492512 ZNF862O60290 1169 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 SKIP12755 728 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 RFX1P22670 979 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 KLRC2P26717 231 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 NECTIN1Q15223 517 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 PTPN14Q15678 1187 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 NOMO2Q5JPE7 1267 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 BCL7CQ8WUZ0 217 aaPredicted RBP15.47■□□□□ 0.07
GPNMB-213ENST00000492512 EMILIN2Q9BXX0 1053 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 SEMA4AQ9H3S1 761 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 DISC1Q9NRI5 854 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 IGSF9Q9P2J2 1179 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 BRPF3Q9ULD4 1205 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 CEP250Q9BV73 2442 aa15.47■□□□□ 0.07
GPNMB-213ENST00000492512 GOLGA8AA7E2F4 631 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 LMNAP02545 664 aaKnown RBP15.46■□□□□ 0.07
GPNMB-213ENST00000492512 SFPQP23246 707 aaKnown RBP eCLIP15.46■□□□□ 0.07
GPNMB-213ENST00000492512 CLCN4P51793 760 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 CDC42EP1Q00587 391 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 LETM2Q2VYF4 491 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 C15orf39Q6ZRI6 1047 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 REXO1Q8N1G1 1221 aaKnown RBP15.46■□□□□ 0.07
GPNMB-213ENST00000492512 TRAIPQ9BWF2 469 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 C6orf50Q9HD87 102 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 DNAJB4Q9UDY4 337 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 STK39Q9UEW8 545 aa15.46■□□□□ 0.07
GPNMB-213ENST00000492512 PIN4Q9Y237 131 aaKnown RBP15.46■□□□□ 0.07
GPNMB-213ENST00000492512 ESYT2A0FGR8 921 aa15.45■□□□□ 0.06
GPNMB-213ENST00000492512 NARSO43776 548 aaKnown RBP15.45■□□□□ 0.06
GPNMB-213ENST00000492512 SSBP05455 408 aaKnown RBP eCLIP15.45■□□□□ 0.06
GPNMB-213ENST00000492512 CNPP09543 421 aaKnown RBP15.45■□□□□ 0.06
GPNMB-213ENST00000492512 SLC11A1P49279 550 aa15.45■□□□□ 0.06
GPNMB-213ENST00000492512 DNM2P50570 870 aa15.45■□□□□ 0.06
GPNMB-213ENST00000492512 DRP2Q13474 957 aa15.45■□□□□ 0.06
GPNMB-213ENST00000492512 NONOQ15233 471 aaKnown RBP eCLIP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms