RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 KIAA1841Q6NSI8 718 aa14.84□□□□□ -0.03
HDAC3-213ENST00000492506 ERMP1Q7Z2K6 904 aa14.84□□□□□ -0.03
HDAC3-213ENST00000492506 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
HDAC3-213ENST00000492506 NKD2Q969F2 451 aaPredicted RBP14.84□□□□□ -0.03
HDAC3-213ENST00000492506 SNX21Q969T3 373 aa14.84□□□□□ -0.03
HDAC3-213ENST00000492506 USTQ9Y2C2 406 aa14.84□□□□□ -0.03
HDAC3-213ENST00000492506 SLC12A7Q9Y666 1083 aa14.84□□□□□ -0.03
HDAC3-213ENST00000492506 UQCRHLA0A096LP55 91 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 UQCRHP07919 91 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 NPR3P17342 541 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 CLCN3P51790 818 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 NAPAP54920 295 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 NLRP11P59045 1033 aaKnown RBP14.83□□□□□ -0.04
HDAC3-213ENST00000492506 HMGN5P82970 282 aaKnown RBP14.83□□□□□ -0.04
HDAC3-213ENST00000492506 RARS2Q5T160 578 aaKnown RBP14.83□□□□□ -0.04
HDAC3-213ENST00000492506 MCTP2Q6DN12 878 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 PPP1R18Q6NYC8 613 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 MIS18BP1Q6P0N0 1132 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 SGMS1Q86VZ5 419 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 TMEM173Q86WV6 379 aaPredicted RBP14.83□□□□□ -0.04
HDAC3-213ENST00000492506 ABI1Q8IZP0 508 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 METTL13Q8N6R0 699 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 TDRD5Q8NAT2 981 aaKnown RBP14.83□□□□□ -0.04
HDAC3-213ENST00000492506 SLC22A17Q8WUG5 538 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 LRRC2Q9BYS8 371 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 IRAK3Q9Y616 596 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 FANCMQ8IYD8 2048 aa14.83□□□□□ -0.04
HDAC3-213ENST00000492506 A0A0U1RQF3 1178 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 NT5C1B-RDH14C9J2C7 533 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 IPO5O00410 1097 aaKnown RBP14.82□□□□□ -0.04
HDAC3-213ENST00000492506 PI15O43692 258 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 CXCL14O95715 111 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 EOMESO95936 686 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 EPCAMP16422 314 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 EIF4BP23588 611 aaKnown RBP14.82□□□□□ -0.04
HDAC3-213ENST00000492506 ADCY7P51828 1080 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 BCAR1P56945 870 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 AP3B2Q13367 1082 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 MICU3Q86XE3 530 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 PLA2G4DQ86XP0 818 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 ADSSL1Q8N142 457 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 HELQQ8TDG4 1101 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 AUTS2Q8WXX7 1259 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 ZBP1Q9H171 429 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 FAM13BQ9NYF5 915 aa14.82□□□□□ -0.04
HDAC3-213ENST00000492506 SMCO2A6NFE2 343 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 ADAMTS3O15072 1205 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 MAGEB2O15479 319 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 CYP3A4P08684 503 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 ZSCAN20P17040 1043 aaPredicted RBP14.81□□□□□ -0.04
HDAC3-213ENST00000492506 AOC1P19801 751 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 ZNF76P36508 570 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 ID4P47928 161 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 METAP2P50579 478 aaKnown RBP eCLIP14.81□□□□□ -0.04
HDAC3-213ENST00000492506 ATAT1Q5SQI0 421 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 ZNF746Q6NUN9 644 aaPredicted RBP14.81□□□□□ -0.04
HDAC3-213ENST00000492506 EFCAB12Q6NXP0 572 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 CLEC17AQ6ZS10 378 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 TRMT1LQ7Z2T5 733 aaKnown RBP14.81□□□□□ -0.04
HDAC3-213ENST00000492506 CKAP2LQ8IYA6 745 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 PLCD3Q8N3E9 789 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 RNF169Q8NCN4 708 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 PRIMPOLQ96LW4 560 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 LSG1Q9H089 658 aaKnown RBP14.81□□□□□ -0.04
HDAC3-213ENST00000492506 MFSD1Q9H3U5 465 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 DZANK1Q9NVP4 752 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 BARHL2Q9NY43 387 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 DBR1Q9UK59 544 aaKnown RBP14.81□□□□□ -0.04
HDAC3-213ENST00000492506 DOCK8Q8NF50 2099 aa14.81□□□□□ -0.04
HDAC3-213ENST00000492506 SLC27A2O14975 620 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 CTSAP10619 480 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 DARSP14868 501 aaKnown RBP14.8□□□□□ -0.04
HDAC3-213ENST00000492506 GPC3P51654 580 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 APOA5Q6Q788 366 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 VPS52Q8N1B4 723 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 LRRC71Q8N4P6 559 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 FLCNQ8NFG4 579 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 BCL7CQ8WUZ0 217 aaPredicted RBP14.8□□□□□ -0.04
HDAC3-213ENST00000492506 ZNF668Q96K58 619 aaPredicted RBP14.8□□□□□ -0.04
HDAC3-213ENST00000492506 GZF1Q9H116 711 aaPredicted RBP14.8□□□□□ -0.04
HDAC3-213ENST00000492506 CYP26B1Q9NR63 512 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 TBC1D22BQ9NU19 505 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 GABBR1Q9UBS5 961 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 CEP131Q9UPN4 1083 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 AKT3Q9Y243 479 aa14.8□□□□□ -0.04
HDAC3-213ENST00000492506 V9GY48 417 aaPredicted RBP14.8□□□□□ -0.04
HDAC3-213ENST00000492506 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.79□□□□□ -0.04
HDAC3-213ENST00000492506 ZNF862O60290 1169 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 FGFR4P22455 802 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 ALDH7A1P49419 539 aaKnown RBP14.79□□□□□ -0.04
HDAC3-213ENST00000492506 POLGP54098 1239 aaPredicted RBP14.79□□□□□ -0.04
HDAC3-213ENST00000492506 ZNF445P59923 1031 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 NECTIN1Q15223 517 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 JAKMIP3Q5VZ66 844 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 TMC5Q6UXY8 1006 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 DDX53Q86TM3 631 aaKnown RBP14.79□□□□□ -0.04
HDAC3-213ENST00000492506 CCDC105Q8IYK2 499 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 ZNF710Q8N1W2 664 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 TMEM169Q96HH4 297 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 ZNF577Q9BSK1 485 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms