RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 LETM2Q2VYF4 491 aa17.22■□□□□ 0.35
MRPL55-231ENST00000492170 ZNF598Q86UK7 904 aaKnown RBP17.22■□□□□ 0.35
MRPL55-231ENST00000492170 ZNF410Q86VK4 478 aa17.22■□□□□ 0.35
MRPL55-231ENST00000492170 VN1R2Q8NFZ6 395 aa17.22■□□□□ 0.35
MRPL55-231ENST00000492170 HELQQ8TDG4 1101 aa17.22■□□□□ 0.35
MRPL55-231ENST00000492170 RSPH1Q8WYR4 309 aa17.22■□□□□ 0.35
MRPL55-231ENST00000492170 PHF7Q9BWX1 381 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-231ENST00000492170 INO80BQ9C086 356 aaPredicted RBP17.22■□□□□ 0.35
MRPL55-231ENST00000492170 CHST12Q9NRB3 414 aa17.22■□□□□ 0.35
MRPL55-231ENST00000492170 SPG21Q9NZD8 308 aa17.22■□□□□ 0.35
MRPL55-231ENST00000492170 KCNJ14Q9UNX9 436 aa17.22■□□□□ 0.35
MRPL55-231ENST00000492170 MUC6Q6W4X9 2439 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 TRIOO75962 3097 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 A0A087WZ62 844 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 DDX11L8A8MPP1 907 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 LOC730098B7Z3J9 87 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 SLC37A4O43826 429 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 CSDE1O75534 798 aaKnown RBP17.21■□□□□ 0.35
MRPL55-231ENST00000492170 STBD1O95210 358 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 GCFC2P16383 781 aaKnown RBP17.21■□□□□ 0.35
MRPL55-231ENST00000492170 ATF7P17544 494 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-231ENST00000492170 PBX3P40426 434 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 RBM10P98175 930 aaKnown RBP17.21■□□□□ 0.35
MRPL55-231ENST00000492170 TWF2Q6IBS0 349 aaKnown RBP17.21■□□□□ 0.35
MRPL55-231ENST00000492170 TMC7Q7Z402 723 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 NEK8Q86SG6 692 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 FAM20AQ96MK3 541 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 CEP89Q96ST8 783 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 SH2D3AQ9BRG2 576 aa17.21■□□□□ 0.35
MRPL55-231ENST00000492170 FDXACB1Q9BRP7 624 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-231ENST00000492170 SLKQ9H2G2 1235 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-231ENST00000492170 SUCLA2Q9P2R7 463 aaPredicted RBP17.21■□□□□ 0.35
MRPL55-231ENST00000492170 STK36Q9NRP7 1315 aa17.21■□□□□ 0.34
MRPL55-231ENST00000492170 DKC1O60832 514 aaKnown RBP eCLIP17.2■□□□□ 0.34
MRPL55-231ENST00000492170 MAFO75444 373 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-231ENST00000492170 SKIP12755 728 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 TECP42680 631 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 PHKA2P46019 1235 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 SCRN1Q12765 414 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 PPP2R5CQ13362 524 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 CBX2Q14781 532 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-231ENST00000492170 PLA2G4FQ68DD2 849 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 TMEM184AQ6ZMB5 413 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 HFE2Q6ZVN8 426 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 RHPN2Q8IUC4 686 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 SLC39A11Q8N1S5 342 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 SUSD6Q92537 303 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 PHF20Q9BVI0 1012 aa17.2■□□□□ 0.34
MRPL55-231ENST00000492170 PIN4Q9Y237 131 aaKnown RBP17.2■□□□□ 0.34
MRPL55-231ENST00000492170 CARNS1A5YM72 827 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 HIDE1A8MVS5 230 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 QARSP47897 775 aaKnown RBP17.19■□□□□ 0.34
MRPL55-231ENST00000492170 ALDH7A1P49419 539 aaKnown RBP17.19■□□□□ 0.34
MRPL55-231ENST00000492170 SMC1AQ14683 1233 aaKnown RBP17.19■□□□□ 0.34
MRPL55-231ENST00000492170 BMS1Q14692 1282 aaKnown RBP17.19■□□□□ 0.34
MRPL55-231ENST00000492170 PPP4R3AQ6IN85 833 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 ANKRD54Q6NXT1 300 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 LLGL2Q6P1M3 1020 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 ANO5Q75V66 913 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 SLC7A3Q8WY07 619 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 EDAQ92838 391 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 RPGRIP1Q96KN7 1286 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 MFSD14AQ96MC6 490 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 NLRP4Q96MN2 994 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 NAP1L4Q99733 375 aaKnown RBP17.19■□□□□ 0.34
MRPL55-231ENST00000492170 TRAIPQ9BWF2 469 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 KCNH6Q9H252 994 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 KCNMB3Q9NPA1 279 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 VAV3Q9UKW4 847 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 PPME1Q9Y570 386 aa17.19■□□□□ 0.34
MRPL55-231ENST00000492170 EML1O00423 815 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 MARCH6O60337 910 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 HOXB8P17481 243 aaPredicted RBP17.18■□□□□ 0.34
MRPL55-231ENST00000492170 RAB27AP51159 221 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 KCNC3Q14003 757 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 CATSPER4Q7RTX7 472 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 CASP10Q92851 521 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 TMEM169Q96HH4 297 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 CYP26B1Q9NR63 512 aa17.18■□□□□ 0.34
MRPL55-231ENST00000492170 TBX3O15119 743 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 CCNT1O60563 726 aaKnown RBP17.17■□□□□ 0.34
MRPL55-231ENST00000492170 PFKFB2O60825 505 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 ZC3H11AO75152 810 aaKnown RBP eCLIP17.17■□□□□ 0.34
MRPL55-231ENST00000492170 P4HBP07237 508 aaKnown RBP17.17■□□□□ 0.34
MRPL55-231ENST00000492170 CA8P35219 290 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 POLGP54098 1239 aaPredicted RBP17.17■□□□□ 0.34
MRPL55-231ENST00000492170 BCAR1P56945 870 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 SYCE2Q6PIF2 218 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 GLB1LQ6UWU2 654 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 PIK3AP1Q6ZUJ8 805 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 KSR1Q8IVT5 923 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 CEP170P1Q96L14 293 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 FAM105AQ9NUU6 356 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 COL4A3BPQ9Y5P4 624 aa17.17■□□□□ 0.34
MRPL55-231ENST00000492170 C2orf71A6NGG8 1288 aa17.16■□□□□ 0.34
MRPL55-231ENST00000492170 NT5C1B-RDH14C9J2C7 533 aa17.16■□□□□ 0.34
MRPL55-231ENST00000492170 RFC5P40937 340 aa17.16■□□□□ 0.34
MRPL55-231ENST00000492170 NPEPPSP55786 919 aa17.16■□□□□ 0.34
MRPL55-231ENST00000492170 TPRNQ4KMQ1 711 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms