RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 HOXA2O43364 376 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 GNL2Q13823 731 aaKnown RBP16.75■□□□□ 0.27
TOM1-215ENST00000491987 CAMK1Q14012 370 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 EMC2Q15006 297 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 RABEP1Q15276 862 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 EXOC8Q8IYI6 725 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 ABI1Q8IZP0 508 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 FBXO18Q8NFZ0 1043 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 SPPL3Q8TCT6 385 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 NEK9Q8TD19 979 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 POF1BQ8WVV4 589 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 PRPF31Q8WWY3 499 aaKnown RBP16.75■□□□□ 0.27
TOM1-215ENST00000491987 PSPC1Q8WXF1 523 aaKnown RBP16.75■□□□□ 0.27
TOM1-215ENST00000491987 HSD17B14Q9BPX1 270 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 INO80BQ9C086 356 aaPredicted RBP16.75■□□□□ 0.27
TOM1-215ENST00000491987 TMEM117Q9H0C3 514 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 FOXP1Q9H334 677 aaPredicted RBP16.75■□□□□ 0.27
TOM1-215ENST00000491987 AAASQ9NRG9 546 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 DACT1Q9NYF0 836 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 PIN4Q9Y237 131 aaKnown RBP16.75■□□□□ 0.27
TOM1-215ENST00000491987 PCDHB12Q9Y5F1 795 aa16.75■□□□□ 0.27
TOM1-215ENST00000491987 TCF20Q9UGU0 1960 aaKnown RBP16.75■□□□□ 0.27
TOM1-215ENST00000491987 H3BQ06 376 aaPredicted RBP16.74■□□□□ 0.27
TOM1-215ENST00000491987 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 IRS1P35568 1242 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 LAMTOR4Q0VGL1 99 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 ZNF174Q15697 407 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 CLLU1OSQ5K130 101 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 TWF2Q6IBS0 349 aaKnown RBP16.74■□□□□ 0.27
TOM1-215ENST00000491987 CATSPER4Q7RTX7 472 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 COLGALT1Q8NBJ5 622 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 TCP11Q8WWU5 503 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 PABPC5Q96DU9 382 aaKnown RBP16.74■□□□□ 0.27
TOM1-215ENST00000491987 CASD1Q96PB1 797 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 CWH43Q9H720 699 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
TOM1-215ENST00000491987 IFT122Q9HBG6 1241 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 CHST12Q9NRB3 414 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 CLDND1Q9NY35 253 aa16.74■□□□□ 0.27
TOM1-215ENST00000491987 A0A0U1RQF3 1178 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 GAS2O43903 313 aaKnown RBP16.73■□□□□ 0.27
TOM1-215ENST00000491987 ST18O60284 1047 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 LYPLA2O95372 231 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 ATF7P17544 494 aaPredicted RBP16.73■□□□□ 0.27
TOM1-215ENST00000491987 HYAL1Q12794 435 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 LEXMQ3ZCV2 418 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 TTC38Q5R3I4 469 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 ZNF598Q86UK7 904 aaKnown RBP16.73■□□□□ 0.27
TOM1-215ENST00000491987 THNSL1Q8IYQ7 743 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 LRRC43Q8N309 656 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.73■□□□□ 0.27
TOM1-215ENST00000491987 HELQQ8TDG4 1101 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 CCDC43Q96MW1 224 aaKnown RBP16.73■□□□□ 0.27
TOM1-215ENST00000491987 MTRQ99707 1265 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 IGFLR1Q9H665 355 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 XPNPEP1Q9NQW7 623 aa16.73■□□□□ 0.27
TOM1-215ENST00000491987 PLXNA4Q9HCM2 1894 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 A0A087WWV3 80 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 FGF18O76093 207 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 EOMESO95936 686 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 OR52Z1P0C646 297 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 LAG3P18627 525 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 GTF2F1P35269 517 aaKnown RBP eCLIP16.72■□□□□ 0.27
TOM1-215ENST00000491987 PHKA2P46019 1235 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 ORC2Q13416 577 aaPredicted RBP16.72■□□□□ 0.27
TOM1-215ENST00000491987 COL19A1Q14993 1142 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 LRRC55Q6ZSA7 311 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 ADGRD2Q7Z7M1 963 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 FERMT3Q86UX7 667 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 NOSTRINQ8IVI9 506 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 PIGOQ8TEQ8 1089 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 MINDY3Q9H8M7 445 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 ANKEF1Q9NU02 776 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 PCDHGC5Q9Y5F6 944 aa16.72■□□□□ 0.27
TOM1-215ENST00000491987 TTC28Q96AY4 2481 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 IL9P15248 144 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 PBX3P40426 434 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 TECP42680 631 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 NBR1Q14596 966 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 LONRF3Q496Y0 759 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 PTCRAQ6ISU1 281 aaPredicted RBP16.71■□□□□ 0.27
TOM1-215ENST00000491987 SRGAP1Q7Z6B7 1085 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 RNF149Q8NC42 400 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 LPPQ93052 612 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 ZNF558Q96NG5 402 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 AGPAT5Q9NUQ2 364 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 FAM105AQ9NUU6 356 aa16.71■□□□□ 0.27
TOM1-215ENST00000491987 NOL7Q9UMY1 257 aaKnown RBP16.71■□□□□ 0.27
TOM1-215ENST00000491987 MUC3AQ02505 3323 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 LINC01565O15544 149 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 ASAP2O43150 1006 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 NCK2O43639 380 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 MED24O75448 989 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 DGAT1O75907 488 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 CD2BP2O95400 341 aaKnown RBP16.7■□□□□ 0.26
TOM1-215ENST00000491987 SPATA31C1P0DKV0 1188 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 RARRES1P49788 294 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 RAB27AP51159 221 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 UBE3AQ05086 875 aa16.7■□□□□ 0.26
TOM1-215ENST00000491987 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms