RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 FSD2A1L4K1 749 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 DDX11L8A8MPP1 907 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 LYPLA2O95372 231 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 ALADP13716 330 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 ZSCAN20P17040 1043 aaPredicted RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 XBP1P17861 261 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 PHKA2P46019 1235 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 DNM2P50570 870 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 CBX2Q14781 532 aaPredicted RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 EPHA7Q15375 998 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 DUSP6Q16828 381 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 LETM2Q2VYF4 491 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 MTERF2Q49AM1 385 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 KCNT2Q6UVM3 1135 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 PIK3AP1Q6ZUJ8 805 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 EXOC8Q8IYI6 725 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 ZNF579Q8NAF0 562 aaKnown RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 VN1R2Q8NFZ6 395 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 SUSD6Q92537 303 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 MRPS27Q92552 414 aaKnown RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 WASF1Q92558 559 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 GTF3C6Q969F1 213 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 PPP2R3CQ969Q6 453 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 HSD17B14Q9BPX1 270 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 JPH2Q9BR39 696 aaPredicted RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 FDXACB1Q9BRP7 624 aaPredicted RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 INO80BQ9C086 356 aaPredicted RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 DACT1Q9NYF0 836 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 SUCLA2Q9P2R7 463 aaPredicted RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 ORC3Q9UBD5 711 aaPredicted RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 SEPT9Q9UHD8 586 aaPredicted RBP9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 RAPGEFL1Q9UHV5 662 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 PCDHGC5Q9Y5F6 944 aa9.4□□□□□ -0.9
SMARCB1-207ENST00000491967 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 PRR33A8MZF0 331 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 DKC1O60832 514 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 CSDE1O75534 798 aaKnown RBP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 LARGE1O95461 756 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 FGFR4P22455 802 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 HOXA11P31270 313 aaPredicted RBP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 HOXD11P31277 338 aaPredicted RBP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 PPM1AP35813 382 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 RFC5P40937 340 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 NRIP1P48552 1158 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 NPEPPSP55786 919 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 POU5F1BQ06416 359 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 ST3GAL1Q11201 340 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 HERC4Q5GLZ8 1057 aaPredicted RBP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 MRPL10Q7Z7H8 261 aaKnown RBP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 SLFN12Q8IYM2 578 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 SLC39A11Q8N1S5 342 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 LRRC43Q8N309 656 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 NSUN7Q8NE18 718 aaKnown RBP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 ZNF668Q96K58 619 aaPredicted RBP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 MTMR9Q96QG7 549 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 SH2D3AQ9BRG2 576 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 S1PR5Q9H228 398 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 IGFLR1Q9H665 355 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 TLE6Q9H808 572 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 NGRNQ9NPE2 291 aaKnown RBP9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 IRAK3Q9Y616 596 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 MYO10Q9HD67 2058 aa9.39□□□□□ -0.91
SMARCB1-207ENST00000491967 CARNS1A5YM72 827 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 LOC730098B7Z3J9 87 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 INPPL1O15357 1258 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 DCXO43602 365 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 GAS2O43903 313 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 CCNT1O60563 726 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 EIF5BO60841 1220 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 OFD1O75665 1012 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 SLITRK3O94933 977 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 SEC24BO95487 1268 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 NEFLP07196 543 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 SKIP12755 728 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 SFPQP23246 707 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 YWHABP31946 246 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 SSTR3P32745 418 aaPredicted RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 NR5A1Q13285 461 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 PCBP1Q15365 356 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 PLA2G4FQ68DD2 849 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 SRGAP1Q7Z6B7 1085 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 IFNLR1Q8IU57 520 aaPredicted RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 KSR1Q8IVT5 923 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 THNSL1Q8IYQ7 743 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 MRPL43Q8N983 215 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 NECAB1Q8N987 351 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 PRPF31Q8WWY3 499 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 ZNF558Q96NG5 402 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 POP1Q99575 1024 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 MRPL9Q9BYD2 267 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 ZSWIM4Q9H7M6 989 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 AGPAT5Q9NUQ2 364 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 SPG21Q9NZD8 308 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 RGL1Q9NZL6 768 aa9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 PUF60Q9UHX1 559 aaKnown RBP9.38□□□□□ -0.91
SMARCB1-207ENST00000491967 C2orf71A6NGG8 1288 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 HIDE1A8MVS5 230 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 BTBD18B2RXH4 712 aa9.37□□□□□ -0.91
SMARCB1-207ENST00000491967 WNT7AO00755 349 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms