RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 NCK2O43639 380 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 SLC37A4O43826 429 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 CSDE1O75534 798 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 PBX3P40426 434 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 NDUFV1P49821 464 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 FAM189BP81408 668 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 SMAD4Q13485 552 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 TARBP2Q15633 366 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 Q4G0T1 1027 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 NAALADL2Q58DX5 795 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 SPOUT1Q5T280 376 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 PIK3AP1Q6ZUJ8 805 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 ADHFE1Q8IWW8 467 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 ZNF710Q8N1W2 664 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 PPP2R3CQ969Q6 453 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 MBOAT7Q96N66 472 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 TMEM161AQ9NX61 479 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 SEPT9Q9UHD8 586 aaPredicted RBP12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 CD207Q9UJ71 328 aa12.36□□□□□ -0.43
TMEM39A-211ENST00000491685 CYP3A7-CYP3A51PA0A087WV96 503 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 EML1O00423 815 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 PER2O15055 1255 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 MAGEB2O15479 319 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 FGF18O76093 207 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 GCFC2P16383 781 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 ATF7P17544 494 aaPredicted RBP12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 CYP3A7P24462 503 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 SFNP31947 248 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 JAK3P52333 1124 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 ERVFC1P60507 584 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 INF2Q27J81 1249 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 MTERF2Q49AM1 385 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 CLLU1OSQ5K130 101 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 MIER3Q7Z3K6 550 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 NEK8Q86SG6 692 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 EFHBQ8N7U6 833 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 CASD1Q96PB1 797 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 MAP7D2Q96T17 732 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 ATP6V0A4Q9HBG4 840 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 PRKAG3Q9UGI9 489 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 KMT2EQ8IZD2 1858 aa12.35□□□□□ -0.43
TMEM39A-211ENST00000491685 FAM205CA6NFA0 338 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 FSCN2O14926 492 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 DARSP14868 501 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 EIF4BP23588 611 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 LETM2Q2VYF4 491 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 EARS2Q5JPH6 523 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 PLA2G4FQ68DD2 849 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 MOXD1Q6UVY6 613 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 ECHDC2Q86YB7 292 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 THNSL1Q8IYQ7 743 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 OXER1Q8TDS5 423 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 ELAC1Q9H777 363 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 NRBP2Q9NSY0 501 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 WRAP73Q9P2S5 460 aaPredicted RBP12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 MUTYHQ9UIF7 546 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 VAV3Q9UKW4 847 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 PCDHB12Q9Y5F1 795 aa12.34□□□□□ -0.43
TMEM39A-211ENST00000491685 IGKV6-21A0A0C4DH24 114 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 CCNT1O60563 726 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 EYA4O95677 639 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 LAG3P18627 525 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 U2AF2P26368 475 aaKnown RBP eCLIP12.33□□□□□ -0.442e-9■■■■■ 27.9
TMEM39A-211ENST00000491685 TMOD1P28289 359 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 TRAPPC10P48553 1259 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 TBC1D8BQ0IIM8 1120 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 NR5A1Q13285 461 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 PLPP4Q5VZY2 271 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 PPP4R3AQ6IN85 833 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 ANO5Q75V66 913 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 ZNF598Q86UK7 904 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 NOSTRINQ8IVI9 506 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 KSR1Q8IVT5 923 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 RNF169Q8NCN4 708 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 SMRP1Q8NCR6 262 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 NLRP7Q8WX94 980 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 SCLT1Q96NL6 688 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 IPO9Q96P70 1041 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 NIFKQ9BYG3 293 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 TMEM117Q9H0C3 514 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 TLE6Q9H808 572 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 DDX25Q9UHL0 483 aaKnown RBP12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 TECTAO75443 2155 aa12.33□□□□□ -0.44
TMEM39A-211ENST00000491685 A0A087WZ62 844 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 MEIS3P2A8K0S8 358 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 HIDE1A8MVS5 230 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 STX6O43752 255 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 SYT1P21579 422 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 UBE3AQ05086 875 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 COASYQ13057 564 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 DUSP6Q16828 381 aa12.32□□□□□ -0.44
TMEM39A-211ENST00000491685 RILPL1Q5EBL4 403 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms