RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 CDCA3Q99618 268 aaPredicted RBP18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 MTRQ99707 1265 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 TLR9Q9NR96 1032 aa18.49■□□□□ 0.55
PDLIM2-217ENST00000491330 JAK2O60674 1132 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 FGF18O76093 207 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 ERLIN2O94905 339 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 FGFR1P11362 822 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 ATP2B1P20020 1258 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 PHKA2P46019 1235 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 MCM2P49736 904 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 CYP4A11Q02928 519 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 GLB1LQ6UWU2 654 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 POP1Q99575 1024 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 SH2D3AQ9BRG2 576 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 FOXP1Q9H334 677 aaPredicted RBP18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 TLE6Q9H808 572 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 ANKEF1Q9NU02 776 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 LZTS1Q9Y250 596 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 STK24Q9Y6E0 443 aa18.48■□□□□ 0.55
PDLIM2-217ENST00000491330 SIP14410 1827 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 H3BQ06 376 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 DGAT1O75907 488 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 LARGE1O95461 756 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 SRGAP2CP0DJJ0 459 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 XRCC6P12956 609 aaKnown RBP eCLIP18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 NPEPPSP55786 919 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 RNASELQ05823 741 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 CTTNQ14247 550 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 HACE1Q8IYU2 909 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 COLGALT1Q8NBJ5 622 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 CNNM3Q8NE01 707 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 PRPF31Q8WWY3 499 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 EIF2AK1Q9BQI3 630 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 RAB34Q9BZG1 259 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 DHX33Q9H6R0 707 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 NGRNQ9NPE2 291 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 SPG21Q9NZD8 308 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 RGL1Q9NZL6 768 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 STK39Q9UEW8 545 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 PRKAG3Q9UGI9 489 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 PTPRSQ13332 1948 aa18.47■□□□□ 0.55
PDLIM2-217ENST00000491330 TTC3P53804 2025 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 GRXCR2A6NFK2 248 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 STBD1O95210 358 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 LINC00271P0C7V0 271 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 MCM7P33993 719 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 GATMP50440 423 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 EMC2Q15006 297 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 KCNT2Q6UVM3 1135 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 GJD3Q8N144 294 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 URGCPQ8TCY9 931 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 MRPS27Q92552 414 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 KIF2CQ99661 725 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 TRAIPQ9BWF2 469 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 UBN1Q9NPG3 1134 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 ENTPD7Q9NQZ7 604 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 KANSL3Q9P2N6 904 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 WDR81Q562E7 1941 aa18.46■□□□□ 0.55
PDLIM2-217ENST00000491330 TMEM150BA6NC51 233 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 LYPLA2O95372 231 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 FGFR4P22455 802 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 AXLP30530 894 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 NRIP1P48552 1158 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 TRAPPC10P48553 1259 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 PLCB3Q01970 1234 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 LAMTOR4Q0VGL1 99 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 HYAL1Q12794 435 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 DRP2Q13474 957 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 EARS2Q5JPH6 523 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 TMC7Q7Z402 723 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 EFHBQ8N7U6 833 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 TNFRSF25Q93038 417 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 TMEM143Q96AN5 459 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 TMEM169Q96HH4 297 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 NECAB3Q96P71 396 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 CASD1Q96PB1 797 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 FAM193BQ96PV7 902 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 CD207Q9UJ71 328 aa18.45■□□□□ 0.54
PDLIM2-217ENST00000491330 SLITRK3O94933 977 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 ALADP13716 330 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 CA8P35219 290 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 GUCY1B3Q02153 619 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 ADAM15Q13444 863 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 HAUS3Q68CZ6 603 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 RBM23Q86U06 439 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 FAM178BQ8IXR5 827 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 RNF149Q8NC42 400 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 HELQQ8TDG4 1101 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 NACC1Q96RE7 527 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 CEP89Q96ST8 783 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 FAM105AQ9NUU6 356 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 DAXXQ9UER7 740 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 CHD9Q3L8U1 2897 aa18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 COL4A4P53420 1690 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-217ENST00000491330 DTNBO60941 627 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 NR1I2O75469 434 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 CSDE1O75534 798 aaKnown RBP18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 POU5F1BQ06416 359 aa18.43■□□□□ 0.54
PDLIM2-217ENST00000491330 SMAD4Q13485 552 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms