RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PCDHB12Q9Y5F1 795 aa20.15■□□□□ 0.82
HMGN1-219ENST00000491183 NCK2O43639 380 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 ATF7P17544 494 aaPredicted RBP20.14■□□□□ 0.81
HMGN1-219ENST00000491183 CYP4A11Q02928 519 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 DLX2Q07687 328 aaPredicted RBP20.14■□□□□ 0.81
HMGN1-219ENST00000491183 ADGRD2Q7Z7M1 963 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 COLGALT1Q8NBJ5 622 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 NLRP4Q96MN2 994 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 HSD17B14Q9BPX1 270 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 EIF2AK1Q9BQI3 630 aaKnown RBP20.14■□□□□ 0.81
HMGN1-219ENST00000491183 IGFLR1Q9H665 355 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 ZSWIM4Q9H7M6 989 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 TTC12Q9H892 705 aaPredicted RBP20.14■□□□□ 0.81
HMGN1-219ENST00000491183 IFT122Q9HBG6 1241 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 CHST12Q9NRB3 414 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 AAASQ9NRG9 546 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 PPME1Q9Y570 386 aa20.14■□□□□ 0.81
HMGN1-219ENST00000491183 LINC01565O15544 149 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 HOXA2O43364 376 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 FGF18O76093 207 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 EOMESO95936 686 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 TXKP42681 527 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 CLLU1OSQ5K130 101 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 OTUD6AQ7L8S5 288 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 TPH2Q8IWU9 490 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 RNF169Q8NCN4 708 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 PRPF31Q8WWY3 499 aaKnown RBP20.13■□□□□ 0.81
HMGN1-219ENST00000491183 SLC7A3Q8WY07 619 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 TMEM143Q96AN5 459 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 LLPHQ9BRT6 129 aaKnown RBP20.13■□□□□ 0.81
HMGN1-219ENST00000491183 INO80BQ9C086 356 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-219ENST00000491183 TMEM60Q9H2L4 133 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 BMP2KQ9NSY1 1161 aaPredicted RBP20.13■□□□□ 0.81
HMGN1-219ENST00000491183 DACT1Q9NYF0 836 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 PCDHGC5Q9Y5F6 944 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 ARID2Q68CP9 1835 aa20.13■□□□□ 0.81
HMGN1-219ENST00000491183 NEMFO60524 1076 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 RFC5P40937 340 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 POLGP54098 1239 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-219ENST00000491183 ADAM15Q13444 863 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 PUS10Q3MIT2 529 aaKnown RBP20.12■□□□□ 0.81
HMGN1-219ENST00000491183 XKR9Q5GH70 373 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 FAM178BQ8IXR5 827 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 EXOC8Q8IYI6 725 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 KHSRPQ92945 711 aaKnown RBP eCLIP20.12■□□□□ 0.815e-7■□□□□ 9.7
HMGN1-219ENST00000491183 C8orf76Q96K31 380 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 ZSCAN31Q96LW9 406 aaPredicted RBP20.12■□□□□ 0.81
HMGN1-219ENST00000491183 TRAIPQ9BWF2 469 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 COL4A3BPQ9Y5P4 624 aa20.12■□□□□ 0.81
HMGN1-219ENST00000491183 BDP1A6H8Y1 2624 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 LYPLA2O95372 231 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 SRGAP2CP0DJJ0 459 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 LAG3P18627 525 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 ATP2B1P20020 1258 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 SFPQP23246 707 aaKnown RBP eCLIP20.11■□□□□ 0.81
HMGN1-219ENST00000491183 ERVFC1P60507 584 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 UBE3AQ05086 875 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 ABI1Q8IZP0 508 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 PSPC1Q8WXF1 523 aaKnown RBP20.11■□□□□ 0.81
HMGN1-219ENST00000491183 XPNPEP1Q9NQW7 623 aa20.11■□□□□ 0.81
HMGN1-219ENST00000491183 TBX10O75333 385 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 MCM7P33993 719 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 PHKA2P46019 1235 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 RBM25P49756 843 aaKnown RBP20.1■□□□□ 0.81
HMGN1-219ENST00000491183 LAMTOR4Q0VGL1 99 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 EMC2Q15006 297 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 SAFBQ15424 915 aaKnown RBP eCLIP20.1■□□□□ 0.81
HMGN1-219ENST00000491183 CSPP1Q1MSJ5 1256 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 KCNT2Q6UVM3 1135 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 CATSPER4Q7RTX7 472 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 THNSL1Q8IYQ7 743 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 HELQQ8TDG4 1101 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 EPHX3Q9H6B9 360 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 MINDY3Q9H8M7 445 aa20.1■□□□□ 0.81
HMGN1-219ENST00000491183 PIN4Q9Y237 131 aaKnown RBP20.1■□□□□ 0.81
HMGN1-219ENST00000491183 A0A087WWV3 80 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 PBX3P40426 434 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 PLCB3Q01970 1234 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 TWF2Q6IBS0 349 aaKnown RBP20.09■□□□□ 0.81
HMGN1-219ENST00000491183 RBM23Q86U06 439 aaKnown RBP20.09■□□□□ 0.81
HMGN1-219ENST00000491183 FERMT3Q86UX7 667 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 LRRC43Q8N309 656 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 FBXO18Q8NFZ0 1043 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 MICAL1Q8TDZ2 1067 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 TCP11Q8WWU5 503 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 LPPQ93052 612 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 TLR9Q9NR96 1032 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 SH2B1Q9NRF2 756 aaPredicted RBP20.09■□□□□ 0.81
HMGN1-219ENST00000491183 ANKEF1Q9NU02 776 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 FAM105AQ9NUU6 356 aa20.09■□□□□ 0.81
HMGN1-219ENST00000491183 POTEMA6NI47 508 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 MEIS3P2A8K0S8 358 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 FSCN2O14926 492 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 ASAP2O43150 1006 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 GAS2O43903 313 aaKnown RBP20.08■□□□□ 0.81
HMGN1-219ENST00000491183 ZNF623O75123 536 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 NRIP1P48552 1158 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 HMGN5P82970 282 aaKnown RBP20.08■□□□□ 0.81
HMGN1-219ENST00000491183 CLUL1Q15846 466 aa20.08■□□□□ 0.81
HMGN1-219ENST00000491183 LONRF3Q496Y0 759 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms