RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 PDE6CP51160 858 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 EDRF1Q3B7T1 1238 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 HERC4Q5GLZ8 1057 aaPredicted RBP20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 ZDHHC24Q6UX98 284 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 ADAT2Q7Z6V5 191 aaKnown RBP20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 FBXO25Q8TCJ0 367 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 U2AF1L4Q8WU68 220 aaKnown RBP20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 C7orf43Q8WVR3 580 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 PRCCQ92733 491 aaPredicted RBP20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 COA1Q9GZY4 146 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 GGT7Q9UJ14 662 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 SNX24Q9Y343 169 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 SCN9AQ15858 1988 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 GOLGA6L10A0A0M3HER8 536 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 OAS1P00973 400 aaKnown RBP20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 NR2F2P24468 414 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 ZNF131P52739 623 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 CACNB1Q02641 598 aaPredicted RBP20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 GALNTL6Q49A17 601 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 KIAA1755Q5JYT7 1200 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 CAPRIN2Q6IMN6 1127 aaKnown RBP20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 ERVK-5Q9HDB9 667 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 SLC5A4Q9NY91 659 aa20.92■□□□□ 0.94
SNAPC3-206ENST00000490969 RPTORQ8N122 1335 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 ADAMTSL1Q8N6G6 1762 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 DDX3YO15523 660 aaKnown RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 SMNDC1O75940 238 aaKnown RBP eCLIP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 AFPP02771 609 aaKnown RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 SCNN1DP51172 638 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 CROCCP2Q86T23 111 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 JAMLQ86YT9 394 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 OSGEPQ9NPF4 335 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 CNOT7Q9UIV1 285 aaKnown RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 USP15Q9Y4E8 981 aaPredicted RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 PCDHAC2Q9Y5I4 1007 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 KIAA0391O15091 583 aaKnown RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 CDC25CP30307 473 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 GALCP54803 685 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 RHBDL3P58872 404 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 PPP4CP60510 307 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 CNGA2Q16280 664 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 STYK1Q6J9G0 422 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 EPS8L3Q8TE67 593 aaKnown RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 KIF9Q9HAQ2 790 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 ARMCX3Q9UH62 379 aaPredicted RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 AJAP1Q9UKB5 411 aaPredicted RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 PPP1R9AQ9ULJ8 1098 aa20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 DIS3Q9Y2L1 958 aaKnown RBP20.91■□□□□ 0.94
SNAPC3-206ENST00000490969 NPHP3-ACAD11A0A0J9YXS1 232 aa20.9■□□□□ 0.94
SNAPC3-206ENST00000490969 DHX34Q14147 1143 aaKnown RBP20.9■□□□□ 0.94
SNAPC3-206ENST00000490969 UBAP2Q5T6F2 1119 aaKnown RBP20.9■□□□□ 0.94
SNAPC3-206ENST00000490969 SPICE1Q8N0Z3 855 aa20.9■□□□□ 0.94
SNAPC3-206ENST00000490969 CNKSR1Q969H4 720 aa20.9■□□□□ 0.94
SNAPC3-206ENST00000490969 NAP1L3Q99457 506 aaPredicted RBP20.9■□□□□ 0.94
SNAPC3-206ENST00000490969 SEMA4AQ9H3S1 761 aa20.9■□□□□ 0.94
SNAPC3-206ENST00000490969 GPR75-ASB3A0A0A6YYF3 556 aa20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 RASA1P20936 1047 aa20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 DRG2P55039 364 aaKnown RBP20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 MIS18BP1Q6P0N0 1132 aa20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 FRMD5Q7Z6J6 570 aa20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 UHMK1Q8TAS1 419 aaKnown RBP20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 MICAL1Q8TDZ2 1067 aa20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 KLHL29Q96CT2 875 aa20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 STMN4Q9H169 189 aaPredicted RBP20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 CARD9Q9H257 536 aa20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 DAGLAQ9Y4D2 1042 aa20.89■□□□□ 0.94
SNAPC3-206ENST00000490969 A8MUI8 341 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 E9PMD0 336 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 KRT16P08779 473 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 SLCO1A2P46721 670 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 JAM2P57087 298 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 COPS2P61201 443 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 ICA1Q05084 483 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 BNIP1Q12981 228 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 MAPK7Q13164 816 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 GBP7Q8N8V2 638 aaPredicted RBP20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 TMEM109Q9BVC6 243 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 CCDC113Q9H0I3 377 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 QSER1Q2KHR3 1735 aa20.89■□□□□ 0.93
SNAPC3-206ENST00000490969 PEX19P40855 299 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 GSTO1P78417 241 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 BTNL9Q6UXG8 535 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 ERICH1Q86X53 443 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 KIF2BQ8N4N8 673 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 SLC35G2Q8TBE7 412 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 GJA10Q969M2 543 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 SPATS2LQ9NUQ6 558 aaKnown RBP20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 GRHL1Q9NZI5 618 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 RASAL2Q9UJF2 1139 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 ZBTB7AO95365 584 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 ADCY7P51828 1080 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 EPHA7Q15375 998 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 TNFAIP8L3Q5GJ75 292 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 GPBP1Q86WP2 473 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 SAAL1Q96ER3 474 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 SIX2Q9NPC8 291 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 CORO1CQ9ULV4 474 aaPredicted RBP20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 NCANO14594 1321 aa20.88■□□□□ 0.93
SNAPC3-206ENST00000490969 SMARCA1P28370 1054 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms