RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 WASF1Q92558 559 aa22.12■■□□□ 1.13
SREBF1-216ENST00000490796 TCF25Q9BQ70 676 aa22.12■■□□□ 1.13
SREBF1-216ENST00000490796 PHF20Q9BVI0 1012 aa22.12■■□□□ 1.13
SREBF1-216ENST00000490796 MRPL9Q9BYD2 267 aaKnown RBP22.12■■□□□ 1.13
SREBF1-216ENST00000490796 NGRNQ9NPE2 291 aaKnown RBP22.12■■□□□ 1.13
SREBF1-216ENST00000490796 SPG21Q9NZD8 308 aa22.12■■□□□ 1.13
SREBF1-216ENST00000490796 A0A087WZ62 844 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 SLC37A4O43826 429 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 MAFO75444 373 aaPredicted RBP22.11■■□□□ 1.13
SREBF1-216ENST00000490796 QARSP47897 775 aaKnown RBP22.11■■□□□ 1.13
SREBF1-216ENST00000490796 BMS1Q14692 1282 aaKnown RBP22.11■■□□□ 1.13
SREBF1-216ENST00000490796 DUSP6Q16828 381 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 PPP4R3AQ6IN85 833 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 B3GNT9Q6UX72 402 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 PIK3AP1Q6ZUJ8 805 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 TMC7Q7Z402 723 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 ZNF410Q86VK4 478 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 EXOC8Q8IYI6 725 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 HELQQ8TDG4 1101 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 SLC7A3Q8WY07 619 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 NLRP4Q96MN2 994 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 FDXACB1Q9BRP7 624 aaPredicted RBP22.11■■□□□ 1.13
SREBF1-216ENST00000490796 BRMS1Q9HCU9 246 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 PLXNA4Q9HCM2 1894 aa22.11■■□□□ 1.13
SREBF1-216ENST00000490796 PFKFB2O60825 505 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 GLP2RO95838 553 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 SKIP12755 728 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 CA8P35219 290 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 ALDH7A1P49419 539 aaKnown RBP22.1■■□□□ 1.13
SREBF1-216ENST00000490796 PPP2R5CQ13362 524 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 LRRC55Q6ZSA7 311 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 CATSPER4Q7RTX7 472 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 RNF135Q8IUD6 432 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 CYP26B1Q9NR63 512 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 RNF19AQ9NV58 838 aa22.1■■□□□ 1.13
SREBF1-216ENST00000490796 ORC3Q9UBD5 711 aaPredicted RBP22.1■■□□□ 1.13
SREBF1-216ENST00000490796 PIN4Q9Y237 131 aaKnown RBP22.1■■□□□ 1.13
SREBF1-216ENST00000490796 USP15Q9Y4E8 981 aaPredicted RBP22.1■■□□□ 1.13
SREBF1-216ENST00000490796 IGKV6-21A0A0C4DH24 114 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 FSCN2O14926 492 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 STBD1O95210 358 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 BAG4O95429 457 aaKnown RBP22.09■■□□□ 1.13
SREBF1-216ENST00000490796 P4HBP07237 508 aaKnown RBP22.09■■□□□ 1.13
SREBF1-216ENST00000490796 PBX3P40426 434 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 POLGP54098 1239 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-216ENST00000490796 CLLU1OSQ5K130 101 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 PLA2G4FQ68DD2 849 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 ANO5Q75V66 913 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 RSPH1Q8WYR4 309 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 CEP170P1Q96L14 293 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 KCNMB3Q9NPA1 279 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 MUTYHQ9UIF7 546 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 TPCN1Q9ULQ1 816 aa22.09■■□□□ 1.13
SREBF1-216ENST00000490796 EML1O00423 815 aa22.08■■□□□ 1.13
SREBF1-216ENST00000490796 ANAPC15P60006 121 aa22.08■■□□□ 1.13
SREBF1-216ENST00000490796 OTUD6AQ7L8S5 288 aa22.08■■□□□ 1.13
SREBF1-216ENST00000490796 ZNF598Q86UK7 904 aaKnown RBP22.08■■□□□ 1.13
SREBF1-216ENST00000490796 TMEM87AQ8NBN3 555 aa22.08■■□□□ 1.13
SREBF1-216ENST00000490796 TMEM169Q96HH4 297 aa22.08■■□□□ 1.13
SREBF1-216ENST00000490796 MUC6Q6W4X9 2439 aa22.08■■□□□ 1.12
SREBF1-216ENST00000490796 CARNS1A5YM72 827 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 TBX3O15119 743 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 TECP42680 631 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 PHKA2P46019 1235 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 RAB27AP51159 221 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 NPEPPSP55786 919 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 SMC1AQ14683 1233 aaKnown RBP22.07■■□□□ 1.12
SREBF1-216ENST00000490796 NCAPH2Q6IBW4 605 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 LLGL2Q6P1M3 1020 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 GLB1LQ6UWU2 654 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 KSR1Q8IVT5 923 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 CEP89Q96ST8 783 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 PHF7Q9BWX1 381 aaPredicted RBP22.07■■□□□ 1.12
SREBF1-216ENST00000490796 VAV3Q9UKW4 847 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 PPME1Q9Y570 386 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 COL4A3BPQ9Y5P4 624 aa22.07■■□□□ 1.12
SREBF1-216ENST00000490796 KRT2P35908 639 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 RFC5P40937 340 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 RBM10P98175 930 aaKnown RBP22.06■■□□□ 1.12
SREBF1-216ENST00000490796 RNASELQ05823 741 aaKnown RBP22.06■■□□□ 1.12
SREBF1-216ENST00000490796 EPHA7Q15375 998 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 LONRF3Q496Y0 759 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 HERC4Q5GLZ8 1057 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-216ENST00000490796 SLFN12Q8IYM2 578 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 SLC39A11Q8N1S5 342 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 OXER1Q8TDS5 423 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 PSPC1Q8WXF1 523 aaKnown RBP22.06■■□□□ 1.12
SREBF1-216ENST00000490796 PGBD4Q96DM1 585 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 RPGRIP1Q96KN7 1286 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 GJB4Q9NTQ9 266 aa22.06■■□□□ 1.12
SREBF1-216ENST00000490796 C5orf42Q9H799 3197 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 HIDE1A8MVS5 230 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 EIF5BO60841 1220 aaKnown RBP22.05■■□□□ 1.12
SREBF1-216ENST00000490796 ZC3H11AO75152 810 aaKnown RBP eCLIP22.05■■□□□ 1.12
SREBF1-216ENST00000490796 ATF7P17544 494 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-216ENST00000490796 AK2P54819 239 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 BCAR1P56945 870 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 ANKRD54Q6NXT1 300 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 VN1R2Q8NFZ6 395 aa22.05■■□□□ 1.12
SREBF1-216ENST00000490796 TCP11Q8WWU5 503 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 577.2 ms