RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 NAA35Q5VZE5 725 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 NUGGCQ68CJ6 796 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TTC23LQ6PF05 361 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 GOLPH3LQ9H4A5 285 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 ITIH6Q6UXX5 1313 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 SLC16A3O15427 465 aaKnown RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 PNMA6AP0CW24 399 aaPredicted RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 PPP2R2AP63151 447 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 C11orf57Q6ZUT1 292 aaPredicted RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 MAML1Q92585 1016 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 CMTM5Q96DZ9 223 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 HNRNPCL2B2RXH8 293 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 E9PMD0 336 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 ENC1O14682 589 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 SCNN1DP51172 638 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TMPRSS15P98073 1019 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 C1orf228Q6PIY5 440 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 PATL1Q86TB9 770 aaKnown RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 SESTD1Q86VW0 696 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 RYBPQ8N488 228 aaPredicted RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 CHGBP05060 677 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 OR6B2Q6IFH4 312 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 MMS22LQ6ZRQ5 1243 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 ICA1LQ8NDH6 482 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 KRT35Q92764 455 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 KLHL8Q9P2G9 620 aaPredicted RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 NOVA2Q9UNW9 492 aaKnown RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TNPO2O14787 897 aaKnown RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 NR3C1P04150 777 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 KRT8P05787 483 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 MTHFD1LQ6UB35 978 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 IFT43Q96FT9 208 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 PIGSQ96S52 555 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 STRBPQ96SI9 672 aaKnown RBP9.42□□□□□ -0.9
LSAMP-205ENST00000490035 ANTXR1Q9H6X2 564 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TMEM51Q9NW97 253 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 BARHL2Q9NY43 387 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 PALLDQ8WX93 1383 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TADA3O75528 432 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 ING2Q9H160 280 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TULP4Q9NRJ4 1543 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 UGP2Q16851 508 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 SLC27A3Q5K4L6 730 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 DSTYKQ6XUX3 929 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TNIP2Q8NFZ5 429 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 RAD54LQ92698 747 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TSC22D3Q99576 134 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 PYCARDQ9ULZ3 195 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 ADGRB3O60242 1522 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 CCDC78A2IDD5 438 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 TTLL4Q14679 1199 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 SGMS1Q86VZ5 419 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 STX19Q8N4C7 294 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 LZICQ8WZA0 190 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 BATF3Q9NR55 127 aa9.42□□□□□ -0.9
LSAMP-205ENST00000490035 MADDQ8WXG6 1647 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 H7C1W4 665 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 CAPN12Q6ZSI9 719 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 OSBPL9Q96SU4 736 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 MAP3K14Q99558 947 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 SAMSN1Q9NSI8 373 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 A0A1B0GW55 424 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DUX4L2P0CJ85 424 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DUX4L3P0CJ86 424 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DUX4L4P0CJ87 422 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DUX4L5P0CJ88 424 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DUX4L6P0CJ89 424 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DUX4L7P0CJ90 424 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 STAT3P40763 770 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 EFTUD2Q15029 972 aaKnown RBP eCLIP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DUX4Q9UBX2 424 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 CNOT8Q9UFF9 292 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 GOLGA8SH3BPF8 625 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 CDH2P19022 906 aaPredicted RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 QARSP47897 775 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 MMP14P50281 582 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 YWHAHQ04917 246 aaPredicted RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 SLC10A5Q5PT55 438 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 USPL1Q5W0Q7 1092 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 C7orf31Q8N865 590 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 NSUN6Q8TEA1 469 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 SCFD1Q8WVM8 642 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 FOPNLQ96NB1 174 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 NXF1Q9UBU9 619 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 PPME1Q9Y570 386 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 VAMP7P51809 220 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 ZNF589Q86UQ0 364 aaPredicted RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 MAP3K20Q9NYL2 800 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 MPP6Q9NZW5 540 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 BCS1LQ9Y276 419 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 KDM6AO15550 1401 aaPredicted RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 KIF1CO43896 1103 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 P4HBP07237 508 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 GPC3P51654 580 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 DUOXA2Q1HG44 320 aa9.41□□□□□ -0.9
LSAMP-205ENST00000490035 HEATR6Q6AI08 1181 aaKnown RBP9.41□□□□□ -0.9
LSAMP-205ENST00000490035 TBC1D19Q8N5T2 526 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms