RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 MRPL11Q9Y3B7 192 aaKnown RBP17.07■□□□□ 0.32
BRD9-208ENST00000489816 MYH11P35749 1972 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 PEX3P56589 373 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 JAM2P57087 298 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 PPP3CAQ08209 521 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 SAAL1Q96ER3 474 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 FEZ2Q9UHY8 353 aaPredicted RBP17.07■□□□□ 0.32
BRD9-208ENST00000489816 HERC5Q9UII4 1024 aaKnown RBP17.07■□□□□ 0.32
BRD9-208ENST00000489816 ZHX2Q9Y6X8 837 aa17.07■□□□□ 0.32
BRD9-208ENST00000489816 NRXN2Q9P2S2 1712 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 GAP43P17677 238 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 ARHGEF19Q8IW93 802 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 UBLCP1Q8WVY7 318 aaPredicted RBP17.06■□□□□ 0.32
BRD9-208ENST00000489816 GLG1Q92896 1179 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 TUFT1Q9NNX1 390 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 PLAAQ9Y263 795 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 BRWD3Q6RI45 1802 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 TESPA1A2RU30 521 aaPredicted RBP17.06■□□□□ 0.32
BRD9-208ENST00000489816 ATP9AO75110 1047 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
BRD9-208ENST00000489816 PPP2R5CQ13362 524 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 UHMK1Q8TAS1 419 aaKnown RBP17.06■□□□□ 0.32
BRD9-208ENST00000489816 CTNNBL1Q8WYA6 563 aaPredicted RBP17.06■□□□□ 0.32
BRD9-208ENST00000489816 BTBD6Q96KE9 485 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 LRRC4CQ9HCJ2 640 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 TELO2Q9Y4R8 837 aa17.06■□□□□ 0.32
BRD9-208ENST00000489816 BZW2Q9Y6E2 419 aaKnown RBP17.06■□□□□ 0.32
BRD9-208ENST00000489816 CCDC169A6NNP5 214 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 OPA1O60313 960 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 SPP2Q13103 211 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 ITGB3BPQ13352 177 aaPredicted RBP17.05■□□□□ 0.32
BRD9-208ENST00000489816 UGCGQ16739 394 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 BMT2Q1RMZ1 405 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 FAM151AQ8WW52 585 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 PGRMC1O00264 195 aaKnown RBP17.05■□□□□ 0.32
BRD9-208ENST00000489816 PLSCR1O15162 318 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 IVLP07476 585 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 SEC24CP53992 1094 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 MAPK7Q13164 816 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 NT5DC3Q86UY8 548 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 RNPC3Q96LT9 517 aaKnown RBP17.05■□□□□ 0.32
BRD9-208ENST00000489816 TAAR1Q96RJ0 339 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 CNTNAP1P78357 1384 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 VGLL3A8MV65 326 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 CLSTN1O94985 981 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 FERP16591 822 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 CAP2P40123 477 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 MARCKSL1P49006 195 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 MAP2K1Q02750 393 aaPredicted RBP17.05■□□□□ 0.32
BRD9-208ENST00000489816 BFSP1Q12934 665 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 PPFIA1Q13136 1202 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 MXRA8Q9BRK3 442 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 GPR88Q9GZN0 384 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 RANBP17Q9H2T7 1088 aaKnown RBP17.05■□□□□ 0.32
BRD9-208ENST00000489816 COG5Q9UP83 839 aa17.05■□□□□ 0.32
BRD9-208ENST00000489816 GREB1LQ9C091 1923 aaPredicted RBP17.05■□□□□ 0.32
BRD9-208ENST00000489816 ASTN2O75129 1339 aaPredicted RBP17.05■□□□□ 0.32
BRD9-208ENST00000489816 ATRNL1Q5VV63 1379 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 C2CD6Q53TS8 623 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 FAM102BQ5T8I3 360 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 IQCKQ8N0W5 287 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 PPM1KQ8N3J5 372 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 APEX2Q9UBZ4 518 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 AMFRQ9UKV5 643 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 SMIM23A6NLE4 172 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 SLC16A3O15427 465 aaKnown RBP17.04■□□□□ 0.32
BRD9-208ENST00000489816 PRKCIP41743 596 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 STK33Q9BYT3 514 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 CTTNBP2NLQ9P2B4 639 aa17.04■□□□□ 0.32
BRD9-208ENST00000489816 MRPS9P82933 396 aaKnown RBP17.03■□□□□ 0.32
BRD9-208ENST00000489816 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.03■□□□□ 0.322e-7■■□□□ 12.7
BRD9-208ENST00000489816 TOPORSQ9NS56 1045 aaPredicted RBP17.03■□□□□ 0.32
BRD9-208ENST00000489816 TCEAL9Q9UHQ7 104 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 TULP2O00295 520 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 FTLP02792 175 aaPredicted RBP17.03■□□□□ 0.32
BRD9-208ENST00000489816 KRT13P13646 458 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 SSTR3P32745 418 aaPredicted RBP17.03■□□□□ 0.32
BRD9-208ENST00000489816 MESDQ14696 234 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 DCAF12L1Q5VU92 463 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 PLEKHO2Q8TD55 490 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 TAF1DQ9H5J8 278 aaPredicted RBP17.03■□□□□ 0.32
BRD9-208ENST00000489816 ERVK-5Q9HDB9 667 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 RNF14Q9UBS8 474 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 FRMPD4Q14CM0 1322 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 PPFIA4O75335 1185 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 RASA3Q14644 834 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 IFI16Q16666 785 aaKnown RBP17.03■□□□□ 0.32
BRD9-208ENST00000489816 GLE1Q53GS7 698 aaKnown RBP17.03■□□□□ 0.32
BRD9-208ENST00000489816 ARHGAP27Q6ZUM4 889 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 CBWD2Q8IUF1 395 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 FLAD1Q8NFF5 587 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 SCFD2Q8WU76 684 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 ALG3Q92685 438 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 KRT35Q92764 455 aa17.03■□□□□ 0.32
BRD9-208ENST00000489816 CAVIN3Q969G5 261 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms