RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 SRGAP2CP0DJJ0 459 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 DARSP14868 501 aaKnown RBP8.73□□□□□ -1.01
SSR1-210ENST00000489567 CYP11B2P19099 503 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 PLCG1P19174 1290 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 GLRA2P23416 452 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 RABGGTBP53611 331 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 SLC12A3P55017 1021 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 PAK2Q13177 524 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 AXDND1Q5T1B0 1012 aaPredicted RBP8.73□□□□□ -1.01
SSR1-210ENST00000489567 USP38Q8NB14 1042 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 BSNDQ8WZ55 320 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 SCLT1Q96NL6 688 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 CCSER1Q9C0I3 900 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 POLR3FQ9H1D9 316 aaPredicted RBP8.73□□□□□ -1.01
SSR1-210ENST00000489567 MINDY3Q9H8M7 445 aa8.73□□□□□ -1.01
SSR1-210ENST00000489567 ENPP3O14638 875 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 MYOGP15173 224 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 ATP2A2P16615 1042 aaKnown RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 RAD51AP2Q09MP3 1159 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 CAPSQ13938 189 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 NAALADL2Q58DX5 795 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 FAM102BQ5T8I3 360 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 ATL3Q6DD88 541 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 RINT1Q6NUQ1 792 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 SHC4Q6S5L8 630 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 C1orf186Q6ZWK4 172 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 EXOC8Q8IYI6 725 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 DAW1Q8N136 415 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 SYT2Q8N9I0 419 aaPredicted RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 RNF149Q8NC42 400 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 TCP11Q8WWU5 503 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 APBB2Q92870 758 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 CDK5RAP3Q96JB5 506 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 PBX4Q9BYU1 374 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 PANK2Q9BZ23 570 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 NT5C3AQ9H0P0 336 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 BCCIPQ9P287 314 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSR1-210ENST00000489567 RCOR1Q9UKL0 485 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 PCDHA7Q9UN72 937 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 YBX2Q9Y2T7 364 aaKnown RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 NPHP3-ACAD11A0A0J9YXS1 232 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 SSBP05455 408 aaKnown RBP eCLIP8.72□□□□□ -1.01
SSR1-210ENST00000489567 PLA2G4BP0C869 781 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 NCLP19338 710 aaKnown RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 ANP32AP39687 249 aaKnown RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 MAPK7Q13164 816 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 MCM6Q14566 821 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 ARSHQ5FYA8 562 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 FAM117BQ6P1L5 589 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 ZNF410Q86VK4 478 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 HERC6Q8IVU3 1022 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 HS6ST3Q8IZP7 471 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 MYOCDQ8IZQ8 938 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 MCPH1Q8NEM0 835 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 LEO1Q8WVC0 666 aaPredicted RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 CALML4Q96GE6 196 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 GCOM2Q9BZD3 368 aaPredicted RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 MTIF3Q9H2K0 278 aaKnown RBP8.72□□□□□ -1.01
SSR1-210ENST00000489567 GDPD2Q9HCC8 539 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 CFAP45Q9UL16 551 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 MICAL3Q7RTP6 2002 aa8.72□□□□□ -1.01
SSR1-210ENST00000489567 SFI1A8K8P3 1242 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 GPR182O15218 404 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 SLC26A4O43511 780 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 CUTAO60888 179 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 HIP1RO75146 1068 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 KCNJ6P48051 423 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 ME1P48163 572 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 PTENP60484 403 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 SMAD3P84022 425 aaKnown RBP8.71□□□□□ -1.01
SSR1-210ENST00000489567 CDC42EP1Q00587 391 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 DHX8Q14562 1220 aaKnown RBP8.71□□□□□ -1.01
SSR1-210ENST00000489567 DSC3Q14574 896 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 MXD4Q14582 209 aaPredicted RBP8.71□□□□□ -1.01
SSR1-210ENST00000489567 CRIPAKQ8N1N5 446 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 ZNF710Q8N1W2 664 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 RASSF8Q8NHQ8 419 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 KCNG4Q8TDN1 519 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 RAD54LQ92698 747 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 SLC9A7Q96T83 725 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 ADAM2Q99965 735 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 KIFC3Q9BVG8 833 aa8.71□□□□□ -1.01
SSR1-210ENST00000489567 TSPYL2Q9H2G4 693 aaPredicted RBP8.71□□□□□ -1.01
SSR1-210ENST00000489567 RBM19Q9Y4C8 960 aaKnown RBP8.71□□□□□ -1.01
SSR1-210ENST00000489567 ADGRA3Q8IWK6 1321 aa8.71□□□□□ -1.02
SSR1-210ENST00000489567 LCHNA4D1U4 455 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 LRRIQ4A6NIV6 560 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 ASAP2O43150 1006 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 EFCAB14O75071 495 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 UPP2O95045 317 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 GJB5O95377 273 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 DNAJB2P25686 324 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 KRT85P78386 507 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 NUCB2P80303 420 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 MBTD1Q05BQ5 628 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 SPRED2Q7Z698 418 aa8.7□□□□□ -1.02
SSR1-210ENST00000489567 PDILTQ8N807 584 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms