RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 NLRP4Q96MN2 994 aa21.19■□□□□ 0.98
MRPL55-230ENST00000489430 ASB2Q96Q27 587 aa21.19■□□□□ 0.98
MRPL55-230ENST00000489430 RAB34Q9BZG1 259 aa21.19■□□□□ 0.98
MRPL55-230ENST00000489430 IFT122Q9HBG6 1241 aa21.19■□□□□ 0.98
MRPL55-230ENST00000489430 MRPL42Q9Y6G3 142 aaKnown RBP21.19■□□□□ 0.98
MRPL55-230ENST00000489430 PRRC2BQ5JSZ5 2229 aaKnown RBP21.19■□□□□ 0.98
MRPL55-230ENST00000489430 SPATA31C1P0DKV0 1188 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 GJB2P29033 226 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 TECP42680 631 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 RARRES1P49788 294 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 LAMTOR4Q0VGL1 99 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 SKIV2LQ15477 1246 aaKnown RBP21.18■□□□□ 0.98
MRPL55-230ENST00000489430 CSPP1Q1MSJ5 1256 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 FERMT3Q86UX7 667 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 CATSPER3Q86XQ3 398 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 ECHDC2Q86YB7 292 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 CCDC43Q96MW1 224 aaKnown RBP21.18■□□□□ 0.98
MRPL55-230ENST00000489430 NACC1Q96RE7 527 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 TMEM117Q9H0C3 514 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 PRDM6Q9NQX0 595 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 AAASQ9NRG9 546 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 DBR1Q9UK59 544 aaKnown RBP21.18■□□□□ 0.98
MRPL55-230ENST00000489430 SMC3Q9UQE7 1217 aa21.18■□□□□ 0.98
MRPL55-230ENST00000489430 ZBTB39O15060 712 aa21.17■□□□□ 0.98
MRPL55-230ENST00000489430 PRPHP41219 470 aa21.17■□□□□ 0.98
MRPL55-230ENST00000489430 TOB1P50616 345 aaPredicted RBP21.17■□□□□ 0.98
MRPL55-230ENST00000489430 HLA-CQ95604 372 aa21.17■□□□□ 0.98
MRPL55-230ENST00000489430 TMEM143Q96AN5 459 aa21.17■□□□□ 0.98
MRPL55-230ENST00000489430 ZNF668Q96K58 619 aaPredicted RBP21.17■□□□□ 0.98
MRPL55-230ENST00000489430 SPTBN5Q9NRC6 3674 aaKnown RBP21.17■□□□□ 0.98
MRPL55-230ENST00000489430 H3BQV1 296 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 NCK2O43639 380 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 RAB27AP51159 221 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 TFDP1Q14186 410 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 FAM102BQ5T8I3 360 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 CATSPER4Q7RTX7 472 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 ZNF598Q86UK7 904 aaKnown RBP21.16■□□□□ 0.98
MRPL55-230ENST00000489430 IFNLR1Q8IU57 520 aaPredicted RBP21.16■□□□□ 0.98
MRPL55-230ENST00000489430 KSR1Q8IVT5 923 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 NFKBIZQ9BYH8 718 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 XPNPEP1Q9NQW7 623 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 PLAGL2Q9UPG8 496 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 PCDHB12Q9Y5F1 795 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 VCANP13611 3396 aa21.16■□□□□ 0.98
MRPL55-230ENST00000489430 TBKBP1A7MCY6 615 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 ZNF623O75123 536 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 PHKA2P46019 1235 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 PTGDRQ13258 359 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 CUL4AQ13619 759 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 PAN2Q504Q3 1202 aaKnown RBP21.15■□□□□ 0.98
MRPL55-230ENST00000489430 MCTP1Q6DN14 999 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 ABI1Q8IZP0 508 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 IGSF22Q8N9C0 903 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 RNF149Q8NC42 400 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 MCPH1Q8NEM0 835 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 COL25A1Q9BXS0 654 aaPredicted RBP21.15■□□□□ 0.98
MRPL55-230ENST00000489430 NSUN3Q9H649 340 aaKnown RBP21.15■□□□□ 0.98
MRPL55-230ENST00000489430 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.15■□□□□ 0.98
MRPL55-230ENST00000489430 AGPAT5Q9NUQ2 364 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 RALGAPA2Q2PPJ7 1873 aa21.15■□□□□ 0.98
MRPL55-230ENST00000489430 COL4A4P53420 1690 aaPredicted RBP21.15■□□□□ 0.98
MRPL55-230ENST00000489430 XIRP2A4UGR9 3374 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 CARNS1A5YM72 827 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 MED24O75448 989 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 CSDE1O75534 798 aaKnown RBP21.14■□□□□ 0.97
MRPL55-230ENST00000489430 SRGAP2CP0DJJ0 459 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 FGFR4P22455 802 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 ARL2P36404 184 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 PTENP60484 403 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 UBE3AQ05086 875 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 PIGOQ8TEQ8 1089 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 DAXXQ9UER7 740 aaPredicted RBP21.14■□□□□ 0.97
MRPL55-230ENST00000489430 LRWD1Q9UFC0 647 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 PIN4Q9Y237 131 aaKnown RBP21.14■□□□□ 0.97
MRPL55-230ENST00000489430 PCDHB6Q9Y5E3 794 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 LOXHD1Q8IVV2 1947 aa21.14■□□□□ 0.97
MRPL55-230ENST00000489430 GRM6O15303 877 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 FGFR1P11362 822 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 LAG3P18627 525 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 AXLP30530 894 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 GATMP50440 423 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 COL19A1Q14993 1142 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 LARP1BQ659C4 914 aaKnown RBP21.13■□□□□ 0.97
MRPL55-230ENST00000489430 TWF2Q6IBS0 349 aaKnown RBP21.13■□□□□ 0.97
MRPL55-230ENST00000489430 LRRC43Q8N309 656 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 CASD1Q96PB1 797 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 MRPL9Q9BYD2 267 aaKnown RBP21.13■□□□□ 0.97
MRPL55-230ENST00000489430 RNF19AQ9NV58 838 aa21.13■□□□□ 0.97
MRPL55-230ENST00000489430 TYW1Q9NV66 732 aaKnown RBP21.13■□□□□ 0.97
MRPL55-230ENST00000489430 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.12■□□□□ 0.97
MRPL55-230ENST00000489430 PDCP20941 246 aa21.12■□□□□ 0.97
MRPL55-230ENST00000489430 NCBP1Q09161 790 aaKnown RBP21.12■□□□□ 0.97
MRPL55-230ENST00000489430 NBR1Q14596 966 aa21.12■□□□□ 0.97
MRPL55-230ENST00000489430 DTHD1Q6ZMT9 781 aa21.12■□□□□ 0.97
MRPL55-230ENST00000489430 KCTD17Q8N5Z5 321 aa21.12■□□□□ 0.97
MRPL55-230ENST00000489430 KLHL23Q8NBE8 558 aa21.12■□□□□ 0.97
MRPL55-230ENST00000489430 SPPL3Q8TCT6 385 aa21.12■□□□□ 0.97
MRPL55-230ENST00000489430 PPP2R3CQ969Q6 453 aa21.12■□□□□ 0.97
MRPL55-230ENST00000489430 CCDC51Q96ER9 411 aa21.12■□□□□ 0.97
MRPL55-230ENST00000489430 FAM105AQ9NUU6 356 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms