RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 OSMRQ99650 979 aa17.29■□□□□ 0.36
UFD1-209ENST00000489406 TMEM121BQ9BXQ6 578 aaPredicted RBP17.29■□□□□ 0.36
UFD1-209ENST00000489406 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.29■□□□□ 0.36
UFD1-209ENST00000489406 TMEM8BA6NDV4 472 aa17.28■□□□□ 0.36
UFD1-209ENST00000489406 FOXD2O60548 495 aaPredicted RBP17.28■□□□□ 0.36
UFD1-209ENST00000489406 KLRC1P26715 233 aa17.28■□□□□ 0.36
UFD1-209ENST00000489406 NRLP54845 237 aa17.28■□□□□ 0.36
UFD1-209ENST00000489406 SIM2Q14190 667 aaPredicted RBP17.28■□□□□ 0.36
UFD1-209ENST00000489406 KIZQ2M2Z5 673 aa17.28■□□□□ 0.36
UFD1-209ENST00000489406 HOMER1Q86YM7 354 aa17.28■□□□□ 0.36
UFD1-209ENST00000489406 MIER1Q8N108 512 aa17.28■□□□□ 0.36
UFD1-209ENST00000489406 FGF14Q92915 247 aa17.28■□□□□ 0.36
UFD1-209ENST00000489406 VN1R3Q9BXE9 311 aa17.28■□□□□ 0.36
UFD1-209ENST00000489406 MRPL9Q9BYD2 267 aaKnown RBP17.28■□□□□ 0.36
UFD1-209ENST00000489406 NCAM2O15394 837 aa17.27■□□□□ 0.36
UFD1-209ENST00000489406 TDGF1P13385 188 aa17.27■□□□□ 0.36
UFD1-209ENST00000489406 ZSCAN20P17040 1043 aaPredicted RBP17.27■□□□□ 0.36
UFD1-209ENST00000489406 LIMK1P53667 647 aa17.27■□□□□ 0.36
UFD1-209ENST00000489406 CRYBB1P53674 252 aaPredicted RBP17.27■□□□□ 0.36
UFD1-209ENST00000489406 SOWAHCQ53LP3 525 aaPredicted RBP17.27■□□□□ 0.36
UFD1-209ENST00000489406 PARM1Q6UWI2 310 aa17.27■□□□□ 0.36
UFD1-209ENST00000489406 CYP26C1Q6V0L0 522 aa17.27■□□□□ 0.36
UFD1-209ENST00000489406 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.27■□□□□ 0.36
UFD1-209ENST00000489406 MTMR8Q96EF0 704 aa17.27■□□□□ 0.36
UFD1-209ENST00000489406 AZI2Q9H6S1 392 aa17.27■□□□□ 0.36
UFD1-209ENST00000489406 PIDD1Q9HB75 910 aa17.27■□□□□ 0.36
UFD1-209ENST00000489406 HELZ2Q9BYK8 2649 aaKnown RBP17.26■□□□□ 0.35
UFD1-209ENST00000489406 ITPR1Q14643 2758 aa17.26■□□□□ 0.35
UFD1-209ENST00000489406 RPS9P46781 194 aaKnown RBP17.26■□□□□ 0.35
UFD1-209ENST00000489406 FOXC1Q12948 553 aa17.26■□□□□ 0.35
UFD1-209ENST00000489406 PCNX4Q63HM2 1172 aa17.26■□□□□ 0.35
UFD1-209ENST00000489406 RSPO2Q6UXX9 243 aaPredicted RBP17.26■□□□□ 0.35
UFD1-209ENST00000489406 ZNF707Q96C28 371 aaPredicted RBP17.26■□□□□ 0.35
UFD1-209ENST00000489406 NELL2Q99435 816 aa17.26■□□□□ 0.35
UFD1-209ENST00000489406 RHOBTB2Q9BYZ6 727 aa17.26■□□□□ 0.35
UFD1-209ENST00000489406 FAM217BQ9NTX9 383 aaPredicted RBP17.26■□□□□ 0.35
UFD1-209ENST00000489406 MYH15Q9Y2K3 1946 aa17.25■□□□□ 0.35
UFD1-209ENST00000489406 KLRF2D3W0D1 207 aa17.25■□□□□ 0.35
UFD1-209ENST00000489406 RBM25P49756 843 aaKnown RBP17.25■□□□□ 0.35
UFD1-209ENST00000489406 SF3A2Q15428 464 aaKnown RBP17.25■□□□□ 0.35
UFD1-209ENST00000489406 PSAPL1Q6NUJ1 521 aa17.25■□□□□ 0.35
UFD1-209ENST00000489406 TBC1D10CQ8IV04 446 aa17.25■□□□□ 0.35
UFD1-209ENST00000489406 ZCCHC14Q8WYQ9 949 aaKnown RBP17.25■□□□□ 0.35
UFD1-209ENST00000489406 ESR2Q92731 530 aa17.25■□□□□ 0.35
UFD1-209ENST00000489406 ADAM33Q9BZ11 813 aa17.25■□□□□ 0.35
UFD1-209ENST00000489406 RXFP3Q9NSD7 469 aa17.25■□□□□ 0.35
UFD1-209ENST00000489406 AKAP13Q12802 2813 aa17.25■□□□□ 0.35
UFD1-209ENST00000489406 LILRB3O75022 631 aa17.24■□□□□ 0.35
UFD1-209ENST00000489406 GALTP07902 379 aa17.24■□□□□ 0.35
UFD1-209ENST00000489406 FZD5Q13467 585 aa17.24■□□□□ 0.35
UFD1-209ENST00000489406 TPRG1Q6ZUI0 275 aa17.24■□□□□ 0.35
UFD1-209ENST00000489406 PHKBQ93100 1093 aa17.24■□□□□ 0.35
UFD1-209ENST00000489406 GPRASP2Q96D09 838 aa17.24■□□□□ 0.35
UFD1-209ENST00000489406 KIF12Q96FN5 646 aa17.24■□□□□ 0.35
UFD1-209ENST00000489406 PIGSQ96S52 555 aa17.24■□□□□ 0.35
UFD1-209ENST00000489406 NEDD4P46934 1319 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 C2CD2LO14523 706 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 HRO43593 1189 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 VTNP04004 478 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 SPATA31D3P0C874 917 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 STAT5BP51692 787 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 PFKPQ01813 784 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 SRSF5Q13243 272 aaKnown RBP17.23■□□□□ 0.35
UFD1-209ENST00000489406 STPG1Q5TH74 334 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 ELMSAN1Q6PJG2 1045 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 SPATA31D4Q6ZUB0 917 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 ZNF598Q86UK7 904 aaKnown RBP17.23■□□□□ 0.35
UFD1-209ENST00000489406 C12orf50Q8NA57 414 aaPredicted RBP17.23■□□□□ 0.35
UFD1-209ENST00000489406 GATA6Q92908 595 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 CDHR1Q96JP9 859 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 LSM14BQ9BX40 385 aaKnown RBP17.23■□□□□ 0.35
UFD1-209ENST00000489406 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 MRPL17Q9NRX2 175 aaKnown RBP17.23■□□□□ 0.35
UFD1-209ENST00000489406 WDFY3Q8IZQ1 3526 aa17.23■□□□□ 0.35
UFD1-209ENST00000489406 SMG1Q96Q15 3661 aaKnown RBP17.22■□□□□ 0.35
UFD1-209ENST00000489406 TOP3BO95985 862 aaKnown RBP17.22■□□□□ 0.35
UFD1-209ENST00000489406 PCP11498 1178 aaKnown RBP17.22■□□□□ 0.35
UFD1-209ENST00000489406 TRAF1Q13077 416 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 CCDC6Q16204 474 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 CCDC178Q5BJE1 867 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 PLPPR4Q7Z2D5 763 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 IQCA1Q86XH1 822 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 GBP3Q9H0R5 595 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 DNAJB4Q9UDY4 337 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 DPP7Q9UHL4 492 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 WASF3Q9UPY6 502 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 NAV2Q8IVL1 2488 aa17.22■□□□□ 0.35
UFD1-209ENST00000489406 DMXL2Q8TDJ6 3036 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 A0A0U1RQF3 1178 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 GPR32O75388 356 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 GLUD1P00367 558 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 ITGB5P18084 799 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 SLC11A1P49279 550 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 AK2P54819 239 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 ADCY1Q08828 1119 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 PPP2R5DQ14738 602 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 SLC35G1Q2M3R5 365 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 USP17L6PQ6QN14 398 aa17.21■□□□□ 0.35
UFD1-209ENST00000489406 ENAHQ8N8S7 591 aaPredicted RBP17.21■□□□□ 0.35
UFD1-209ENST00000489406 SMARCC2Q8TAQ2 1214 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms