RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 USO1O60763 962 aaKnown RBP15.88■□□□□ 0.13
BRCA1-218ENST00000489037 SKIP12755 728 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 FGFR4P22455 802 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 ATP2C1P98194 919 aaPredicted RBP15.88■□□□□ 0.13
BRCA1-218ENST00000489037 NCBP1Q09161 790 aaKnown RBP15.88■□□□□ 0.13
BRCA1-218ENST00000489037 GRB10Q13322 594 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 DSC3Q14574 896 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 EPC2Q52LR7 807 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 ARL6IP4Q66PJ3 421 aaKnown RBP15.88■□□□□ 0.13
BRCA1-218ENST00000489037 POTEGQ6S5H5 508 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 TMEM192Q8IY95 271 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 IGSF22Q8N9C0 903 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 RNF149Q8NC42 400 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 MCPH1Q8NEM0 835 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 ZNF689Q96CS4 500 aaPredicted RBP15.88■□□□□ 0.13
BRCA1-218ENST00000489037 TMEM161AQ9NX61 479 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 LMCD1Q9NZU5 365 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 COL4A6Q14031 1691 aa15.88■□□□□ 0.13
BRCA1-218ENST00000489037 EPOPA6NHQ4 379 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 CSDE1O75534 798 aaKnown RBP15.87■□□□□ 0.13
BRCA1-218ENST00000489037 RB1P06400 928 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 POU3F3P20264 500 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-218ENST00000489037 SYT1P21579 422 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 CTNNB1P35222 781 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 FAM189BP81408 668 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 CCDC85BQ15834 202 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-218ENST00000489037 PTPROQ16827 1216 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 PAN2Q504Q3 1202 aaKnown RBP15.87■□□□□ 0.13
BRCA1-218ENST00000489037 SPOUT1Q5T280 376 aaKnown RBP15.87■□□□□ 0.13
BRCA1-218ENST00000489037 TWF2Q6IBS0 349 aaKnown RBP15.87■□□□□ 0.13
BRCA1-218ENST00000489037 ABI1Q8IZP0 508 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 GDPD5Q8WTR4 605 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 XPNPEP1Q9NQW7 623 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 KIAA1024Q9UPX6 916 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 DNM3Q9UQ16 869 aa15.87■□□□□ 0.13
BRCA1-218ENST00000489037 PIN4Q9Y237 131 aaKnown RBP15.87■□□□□ 0.13
BRCA1-218ENST00000489037 VWA3AA6NCI4 1184 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 TBKBP1A7MCY6 615 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 ERLIN2O94905 339 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 EOMESO95936 686 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 POU5F1BQ06416 359 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 GPM6BQ13491 265 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 PCBP1Q15365 356 aaKnown RBP eCLIP15.86■□□□□ 0.13
BRCA1-218ENST00000489037 PADI6Q6TGC4 694 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 MAEAQ7L5Y9 396 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 SPRED2Q7Z698 418 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 CRIPAKQ8N1N5 446 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 RNF169Q8NCN4 708 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 CDK5RAP3Q96JB5 506 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 POLR3FQ9H1D9 316 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-218ENST00000489037 RC3H2Q9HBD1 1191 aaKnown RBP15.86■□□□□ 0.13
BRCA1-218ENST00000489037 IFT122Q9HBG6 1241 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 AAASQ9NRG9 546 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 DDX19AQ9NUU7 478 aaKnown RBP15.86■□□□□ 0.13
BRCA1-218ENST00000489037 MTCH2Q9Y6C9 303 aa15.86■□□□□ 0.13
BRCA1-218ENST00000489037 COL4A4P53420 1690 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-218ENST00000489037 A0A0U1RQF3 1178 aa15.85■□□□□ 0.13
BRCA1-218ENST00000489037 PDIA4P13667 645 aaKnown RBP15.85■□□□□ 0.13
BRCA1-218ENST00000489037 ARL2P36404 184 aa15.85■□□□□ 0.13
BRCA1-218ENST00000489037 BMPR1AP36894 532 aa15.85■□□□□ 0.13
BRCA1-218ENST00000489037 RAB27AP51159 221 aa15.85■□□□□ 0.13
BRCA1-218ENST00000489037 SKIV2LQ15477 1246 aaKnown RBP15.85■□□□□ 0.13
BRCA1-218ENST00000489037 ZRSR1Q15695 479 aaKnown RBP15.85■□□□□ 0.13
BRCA1-218ENST00000489037 FAM102BQ5T8I3 360 aa15.85■□□□□ 0.13
BRCA1-218ENST00000489037 ECHDC2Q86YB7 292 aa15.85■□□□□ 0.13
BRCA1-218ENST00000489037 CLP1Q92989 425 aaKnown RBP15.85■□□□□ 0.13
BRCA1-218ENST00000489037 C11orf84Q9BUA3 381 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-218ENST00000489037 PLVAPQ9BX97 442 aa15.85■□□□□ 0.13
BRCA1-218ENST00000489037 MYH11P35749 1972 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 H3BNC9 293 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 INO80B-WBP1J3KQ70 363 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 CYP11B2P19099 503 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 AXLP30530 894 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 PTENP60484 403 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 PPP2R5AQ15172 486 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 NAALADL2Q58DX5 795 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 ZBTB8OSQ8IWT0 167 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 KCTD17Q8N5Z5 321 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 PGBD4Q96DM1 585 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 AK8Q96MA6 479 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 TMEM117Q9H0C3 514 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 NT5C3AQ9H0P0 336 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 BHMT2Q9H2M3 363 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 ZSCAN16Q9H4T2 348 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-218ENST00000489037 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 PCDHB12Q9Y5F1 795 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 MRPL42Q9Y6G3 142 aaKnown RBP15.84■□□□□ 0.13
BRCA1-218ENST00000489037 KIAA1671Q9BY89 1806 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 CHD9Q3L8U1 2897 aa15.84■□□□□ 0.13
BRCA1-218ENST00000489037 LRRIQ4A6NIV6 560 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 PP2D1A8MPX8 630 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 C5orf67F2Z3F1 127 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 STX6O43752 255 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 LPXNO60711 386 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 EYA4O95677 639 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 FGFR1P11362 822 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 GLRA2P23416 452 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 CDC25AP30304 524 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 UBA7P41226 1012 aa15.83■□□□□ 0.12
BRCA1-218ENST00000489037 GATMP50440 423 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms