RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 USP34Q70CQ2 3546 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.16□□□□□ -0.46
YIPF3-207ENST00000488966 MSH4O15457 936 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 CHMP2AO43633 222 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 ZC3H11AO75152 810 aaKnown RBP eCLIP12.16□□□□□ -0.46
YIPF3-207ENST00000488966 CTSAP10619 480 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 TBC1D8BQ0IIM8 1120 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 BMS1Q14692 1282 aaKnown RBP12.16□□□□□ -0.46
YIPF3-207ENST00000488966 TARBP2Q15633 366 aaKnown RBP12.16□□□□□ -0.46
YIPF3-207ENST00000488966 TSGA10IPQ3SY00 556 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 ATAT1Q5SQI0 421 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
YIPF3-207ENST00000488966 KIAA1841Q6NSI8 718 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 TDRD5Q8NAT2 981 aaKnown RBP12.16□□□□□ -0.46
YIPF3-207ENST00000488966 SLC22A17Q8WUG5 538 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 BCL7CQ8WUZ0 217 aaPredicted RBP12.16□□□□□ -0.46
YIPF3-207ENST00000488966 LPPQ93052 612 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 GJA10Q969M2 543 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 UNC45AQ9H3U1 944 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 DZANK1Q9NVP4 752 aa12.16□□□□□ -0.46
YIPF3-207ENST00000488966 DBR1Q9UK59 544 aaKnown RBP12.16□□□□□ -0.46
YIPF3-207ENST00000488966 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 TMEM150BA6NC51 233 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 PRR23AA6NEV1 266 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 MEIS3P2A8K0S8 358 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 GAS7O60861 476 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 CPA1P15085 419 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 GNA11P29992 359 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 NBL1P41271 181 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 PHKA2P46019 1235 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 LONRF3Q496Y0 759 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 TMC5Q6UXY8 1006 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 DDX53Q86TM3 631 aaKnown RBP12.15□□□□□ -0.46
YIPF3-207ENST00000488966 SKAP1Q86WV1 359 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 TMEM87AQ8NBN3 555 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 CCDC12Q8WUD4 166 aaPredicted RBP12.15□□□□□ -0.46
YIPF3-207ENST00000488966 SLC5A5Q92911 643 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 IGSF21Q96ID5 467 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 GCOM2Q9BZD3 368 aaPredicted RBP12.15□□□□□ -0.46
YIPF3-207ENST00000488966 NRDE2Q9H7Z3 1164 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 CHST12Q9NRB3 414 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 TBC1D13Q9NVG8 400 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 USTQ9Y2C2 406 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 IRAK3Q9Y616 596 aa12.15□□□□□ -0.46
YIPF3-207ENST00000488966 A0A087WZ62 844 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 PRPF3O43395 683 aaKnown RBP12.14□□□□□ -0.47
YIPF3-207ENST00000488966 B4GALT3O60512 393 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 STBD1O95210 358 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 GALTP07902 379 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 CLCN5P51795 746 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 POLGP54098 1239 aaPredicted RBP12.14□□□□□ -0.47
YIPF3-207ENST00000488966 FGD1P98174 961 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 MTERF2Q49AM1 385 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 NOMO2Q5JPE7 1267 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 LRCH2Q5VUJ6 765 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 CWF19L1Q69YN2 538 aaKnown RBP12.14□□□□□ -0.47
YIPF3-207ENST00000488966 TWF2Q6IBS0 349 aaKnown RBP12.14□□□□□ -0.47
YIPF3-207ENST00000488966 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 PHKBQ93100 1093 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 CCDC136Q96JN2 1154 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 CEP89Q96ST8 783 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 RIT2Q99578 217 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 SH2D3AQ9BRG2 576 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 FDXACB1Q9BRP7 624 aaPredicted RBP12.14□□□□□ -0.47
YIPF3-207ENST00000488966 TRAIPQ9BWF2 469 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 VN1R3Q9BXE9 311 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 NIFKQ9BYG3 293 aaKnown RBP12.14□□□□□ -0.47
YIPF3-207ENST00000488966 MFSD1Q9H3U5 465 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 SEPT9Q9UHD8 586 aaPredicted RBP12.14□□□□□ -0.47
YIPF3-207ENST00000488966 INPP5FQ9Y2H2 1132 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 EVPLQ92817 2033 aa12.14□□□□□ -0.47
YIPF3-207ENST00000488966 ZFHX2Q9C0A1 2572 aaPredicted RBP12.14□□□□□ -0.47
YIPF3-207ENST00000488966 IGKV6-21A0A0C4DH24 114 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 OFD1O75665 1012 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 SFNP31947 248 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 USP11P51784 963 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 JAK3P52333 1124 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 GIT2Q14161 759 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 KRT32Q14532 448 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 PTPN14Q15678 1187 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 Q6ZUG5 572 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 FRMD5Q7Z6J6 570 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 GPR149Q86SP6 731 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 CABP7Q86V35 215 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 KSR1Q8IVT5 923 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 FLCNQ8NFG4 579 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 BICD2Q8TD16 824 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 TEKT3Q9BXF9 490 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 CYP26B1Q9NR63 512 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 FAM105AQ9NUU6 356 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 VPS54Q9P1Q0 977 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 DNAJB4Q9UDY4 337 aa12.13□□□□□ -0.47
YIPF3-207ENST00000488966 PIN4Q9Y237 131 aaKnown RBP12.13□□□□□ -0.47
YIPF3-207ENST00000488966 PLXNA3P51805 1871 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 PI15O43692 258 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 ZNF623O75123 536 aa12.12□□□□□ -0.47
YIPF3-207ENST00000488966 PSMD10O75832 226 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms