RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 NRN1LQ496H8 165 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 KRT40Q6A162 431 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 GIMAP6Q6P9H5 292 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 KANSL1Q7Z3B3 1105 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 C11orf74Q86VG3 221 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 SGMS1Q86VZ5 419 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 D2HGDHQ8N465 521 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 FERMT2Q96AC1 680 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 FAM89AQ96GI7 184 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 ZNF496Q96IT1 587 aaPredicted RBP6.86□□□□□ -1.31
PTPN4-212ENST00000488896 SLC6A15Q9H2J7 730 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 NCDNQ9UBB6 729 aa6.86□□□□□ -1.31
PTPN4-212ENST00000488896 A0A087X0B3 334 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 TLDC2A0PJX2 215 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 DAPK3O43293 454 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 OPHN1O60890 802 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 FKBP9O95302 570 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 OCRLQ01968 901 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 LRRC32Q14392 662 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 USP39Q53GS9 565 aaKnown RBP6.85□□□□□ -1.31
PTPN4-212ENST00000488896 ESPNLQ6ZVH7 1005 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 FKBP9P1Q75LS8 142 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 UBR7Q8N806 425 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 PLA2G15Q8NCC3 412 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 RABGGTAQ92696 567 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 LPPQ93052 612 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 VPS11Q9H270 941 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 TMPRSS5Q9H3S3 457 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 TLR9Q9NR96 1032 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 USP18Q9UMW8 372 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 TESMINQ9Y4I5 508 aa6.85□□□□□ -1.31
PTPN4-212ENST00000488896 A0A0A6YYJ9 748 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 ST20-MTHFSA0A0A6YYL1 179 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 MAFGO15525 162 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 TOX4O94842 621 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 HIBADHP31937 336 aaKnown RBP6.84□□□□□ -1.31
PTPN4-212ENST00000488896 LSSP48449 732 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 HHEXQ03014 270 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 GAREM2Q75VX8 874 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 CLEC14AQ86T13 490 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 EDAQ92838 391 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 EXTL1Q92935 676 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 GPHA2Q96T91 129 aa6.84□□□□□ -1.31
PTPN4-212ENST00000488896 PITHD1Q9GZP4 211 aaPredicted RBP6.84□□□□□ -1.31
PTPN4-212ENST00000488896 MYPNQ86TC9 1320 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 UBE2QL1A1L167 161 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 CAPN14A8MX76 684 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 RAB11FIP3O75154 756 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 FSHBP01225 129 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 C6P13671 934 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 LSP1P33241 339 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 DDB1Q16531 1140 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 PLEKHG4Q58EX7 1191 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 TAF7LQ5H9L4 462 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 ZBTB41Q5SVQ8 909 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 BROXQ5VW32 411 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 MAMDC4Q6UXC1 1216 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 USP7Q93009 1102 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 HIST1H2AHQ96KK5 128 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 HIST1H2AJQ99878 128 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 ZNF341Q9BYN7 854 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 ANO3Q9BYT9 981 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 RCAN3Q9UKA8 241 aa6.83□□□□□ -1.32
PTPN4-212ENST00000488896 TMA7Q9Y2S6 64 aaKnown RBP6.83□□□□□ -1.32
PTPN4-212ENST00000488896 A0A0A6YYK5 440 aaPredicted RBP6.82□□□□□ -1.32
PTPN4-212ENST00000488896 CLEC2LP0C7M8 214 aa6.82□□□□□ -1.32
PTPN4-212ENST00000488896 TERF2Q15554 542 aa6.82□□□□□ -1.32
PTPN4-212ENST00000488896 ZNF610Q8N9Z0 462 aa6.82□□□□□ -1.32
PTPN4-212ENST00000488896 UIMC1Q96RL1 719 aa6.82□□□□□ -1.32
PTPN4-212ENST00000488896 SOX7Q9BT81 388 aa6.82□□□□□ -1.32
PTPN4-212ENST00000488896 ZNF747Q9BV97 191 aa6.82□□□□□ -1.32
PTPN4-212ENST00000488896 HAPLN2Q9GZV7 340 aa6.82□□□□□ -1.32
PTPN4-212ENST00000488896 SLKQ9H2G2 1235 aaPredicted RBP6.82□□□□□ -1.32
PTPN4-212ENST00000488896 SH3BP1Q9Y3L3 701 aa6.82□□□□□ -1.32
PTPN4-212ENST00000488896 PRSS38A1L453 326 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 VSIG10L2P0DP72 767 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 STRN3Q13033 797 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 ATP13A4Q4VNC1 1196 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 SDE2Q6IQ49 451 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 RNF207Q6ZRF8 634 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 C1orf210Q8IVY1 113 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 SLC5A5Q92911 643 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 CSRNP2Q9H175 543 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 MSL2Q9HCI7 577 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 IL23AQ9NPF7 189 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 USP36Q9P275 1121 aaKnown RBP6.81□□□□□ -1.32
PTPN4-212ENST00000488896 MAPRE3Q9UPY8 281 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 NOC2LQ9Y3T9 749 aaKnown RBP6.81□□□□□ -1.32
PTPN4-212ENST00000488896 PCDHB6Q9Y5E3 794 aa6.81□□□□□ -1.32
PTPN4-212ENST00000488896 PMS2P1A4D2B8 440 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 KDM1AO60341 852 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 FSBPO95073 299 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 TACR2P21452 398 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 ID4P47928 161 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 ADAM8P78325 824 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 PHC1P78364 1004 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 GPR158Q5T848 1215 aa6.8□□□□□ -1.32
PTPN4-212ENST00000488896 DDX46Q7L014 1031 aaKnown RBP6.8□□□□□ -1.32
PTPN4-212ENST00000488896 ADGRE4PQ86SQ3 457 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms