RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 POLR3FQ9H1D9 316 aaPredicted RBP20.72■□□□□ 0.91
PTCD3-217ENST00000488801 GPRC5CQ9NQ84 441 aa20.72■□□□□ 0.91
PTCD3-217ENST00000488801 ST3GAL5Q9UNP4 418 aa20.72■□□□□ 0.91
PTCD3-217ENST00000488801 GPR182O15218 404 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 MGEA5O60502 916 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 KCNJ6P48051 423 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 MAPK7Q13164 816 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 SPECC1Q5M775 1068 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 ODR4Q5SWX8 454 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 RINT1Q6NUQ1 792 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 C1orf186Q6ZWK4 172 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 HERC6Q8IVU3 1022 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 DAW1Q8N136 415 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 SYT2Q8N9I0 419 aaPredicted RBP20.71■□□□□ 0.91
PTCD3-217ENST00000488801 KCNG4Q8TDN1 519 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 BSNDQ8WZ55 320 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 NLRP4Q96MN2 994 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 RUSC1Q9BVN2 902 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 PBX4Q9BYU1 374 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 GCOM2Q9BZD3 368 aaPredicted RBP20.71■□□□□ 0.91
PTCD3-217ENST00000488801 MINDY3Q9H8M7 445 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 RC3H2Q9HBD1 1191 aaKnown RBP20.71■□□□□ 0.91
PTCD3-217ENST00000488801 RCOR1Q9UKL0 485 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 CFAP45Q9UL16 551 aa20.71■□□□□ 0.91
PTCD3-217ENST00000488801 GJB5O95377 273 aa20.7■□□□□ 0.9
PTCD3-217ENST00000488801 PTENP60484 403 aa20.7■□□□□ 0.9
PTCD3-217ENST00000488801 FOXD4L6Q3SYB3 417 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-217ENST00000488801 NAALADL2Q58DX5 795 aa20.7■□□□□ 0.9
PTCD3-217ENST00000488801 CDCA2Q69YH5 1023 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-217ENST00000488801 FOXD4L3Q6VB84 417 aaPredicted RBP20.7■□□□□ 0.9
PTCD3-217ENST00000488801 SRGAP1Q7Z6B7 1085 aa20.7■□□□□ 0.9
PTCD3-217ENST00000488801 RNF149Q8NC42 400 aa20.7■□□□□ 0.9
PTCD3-217ENST00000488801 CALML4Q96GE6 196 aa20.7■□□□□ 0.9
PTCD3-217ENST00000488801 CHAMP1Q96JM3 812 aa20.7■□□□□ 0.9
PTCD3-217ENST00000488801 KCND2Q9NZV8 630 aa20.7■□□□□ 0.9
PTCD3-217ENST00000488801 A0A087X0B3 334 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 ENPP3O14638 875 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 CUTAO60888 179 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 GUCY2CP25092 1073 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 PBX2P40425 430 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 NUCB2P80303 420 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 RAD54LQ92698 747 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 TOP1MTQ969P6 601 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 CDK5RAP3Q96JB5 506 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 PLIN2Q99541 437 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 INO80BQ9C086 356 aaPredicted RBP20.69■□□□□ 0.9
PTCD3-217ENST00000488801 YBX2Q9Y2T7 364 aaKnown RBP20.69■□□□□ 0.9
PTCD3-217ENST00000488801 PCDHA11Q9Y5I1 949 aa20.69■□□□□ 0.9
PTCD3-217ENST00000488801 TMEM265A0A087WTH1 108 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 CSDE1O75534 798 aaKnown RBP20.68■□□□□ 0.9
PTCD3-217ENST00000488801 AMHP03971 560 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 PLA2G4BP0C869 781 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 SFPQP23246 707 aaKnown RBP eCLIP20.68■□□□□ 0.9
PTCD3-217ENST00000488801 DNAJB2P25686 324 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 HTRA4P83105 476 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-217ENST00000488801 ZRSR1Q15695 479 aaKnown RBP20.68■□□□□ 0.9
PTCD3-217ENST00000488801 SHC4Q6S5L8 630 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 TMCO2Q7Z6W1 182 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-217ENST00000488801 SCLT1Q96NL6 688 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 TIPINQ9BVW5 301 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 RGS18Q9NS28 235 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 STK17AQ9UEE5 414 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 DAXXQ9UER7 740 aaPredicted RBP20.68■□□□□ 0.9
PTCD3-217ENST00000488801 PCDHA7Q9UN72 937 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 ATP6V1DQ9Y5K8 247 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 PLXNA4Q9HCM2 1894 aa20.68■□□□□ 0.9
PTCD3-217ENST00000488801 ANK1P16157 1881 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 C9IYK1 514 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 FGFR4P22455 802 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 PHKA2P46019 1235 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 KRT85P78386 507 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 MBTD1Q05BQ5 628 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 NFX1Q12986 1120 aaKnown RBP20.67■□□□□ 0.9
PTCD3-217ENST00000488801 TFDP1Q14186 410 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 PCBP1Q15365 356 aaKnown RBP eCLIP20.67■□□□□ 0.9
PTCD3-217ENST00000488801 RAB30Q15771 203 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 AMHR2Q16671 573 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 ARSHQ5FYA8 562 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 MYOCDQ8IZQ8 938 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 SP7Q8TDD2 431 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-217ENST00000488801 LEO1Q8WVC0 666 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-217ENST00000488801 LARP4BQ92615 738 aaKnown RBP20.67■□□□□ 0.9
PTCD3-217ENST00000488801 KIFAP3Q92845 792 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 TRAIPQ9BWF2 469 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 AGPAT5Q9NUQ2 364 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 CIZ1Q9ULV3 898 aaPredicted RBP20.67■□□□□ 0.9
PTCD3-217ENST00000488801 ADGRA3Q8IWK6 1321 aa20.67■□□□□ 0.9
PTCD3-217ENST00000488801 SRGAP2CP0DJJ0 459 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 ANP32AP39687 249 aaKnown RBP20.66■□□□□ 0.9
PTCD3-217ENST00000488801 NAMPTP43490 491 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 RABGGTBP53611 331 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 E2F4Q16254 413 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 FAM102BQ5T8I3 360 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 MAEAQ7L5Y9 396 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 CCDC113Q9H0I3 377 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 C1orf112Q9NSG2 853 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 CCDC39Q9UFE4 941 aa20.66■□□□□ 0.9
PTCD3-217ENST00000488801 HIP1RO75146 1068 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 TXLNAP40222 546 aa20.65■□□□□ 0.9
PTCD3-217ENST00000488801 SARSP49591 514 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms