RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CYP11B2P19099 503 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 THPOP40225 353 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 MYL5Q02045 173 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 C1orf186Q6ZWK4 172 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 TRIML1Q8N9V2 468 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 CAGE1Q8TC20 777 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 TMEM143Q96AN5 459 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 PRIMPOLQ96LW4 560 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 JPH2Q9BR39 696 aaPredicted RBP21.4■■□□□ 1.02
CCM2-216ENST00000488727 VTNP04004 478 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 SARSP49591 514 aaKnown RBP21.39■■□□□ 1.01
CCM2-216ENST00000488727 GSDMDP57764 484 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 TMEM62Q0P6H9 643 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 LRMPQ12912 555 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 ZNF618Q5T7W0 954 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 TRAF7Q6Q0C0 670 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 MAEAQ7L5Y9 396 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 LRRC8AQ8IWT6 810 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 EXOC8Q8IYI6 725 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 IQUBQ8NA54 791 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 WNT8AQ9H1J5 351 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 POLD4Q9HCU8 107 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 GPRC5CQ9NQ84 441 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 SERTAD1Q9UHV2 236 aa21.39■■□□□ 1.01
CCM2-216ENST00000488727 SCN5AQ14524 2016 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 PITPNM1O00562 1244 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 CTSHP09668 335 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 SYN1P17600 705 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 TMOD1P28289 359 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 BFSP2Q13515 415 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 ARSHQ5FYA8 562 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 DNTTIP2Q5QJE6 756 aaKnown RBP21.38■■□□□ 1.01
CCM2-216ENST00000488727 GPBP1Q86WP2 473 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 HSD3B7Q9H2F3 369 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 ZMYND8Q9ULU4 1186 aaPredicted RBP21.38■■□□□ 1.01
CCM2-216ENST00000488727 AKT3Q9Y243 479 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 GAS2O43903 313 aaKnown RBP21.38■■□□□ 1.01
CCM2-216ENST00000488727 CYP2C18P33260 490 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 RAD51AP2Q09MP3 1159 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 CCDC155Q8N6L0 562 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 MCPH1Q8NEM0 835 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 SPATA20Q8TB22 786 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 CCDC34Q96HJ3 373 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 MAP7D2Q96T17 732 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 PPP1R16BQ96T49 567 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 SUCLA2Q9P2R7 463 aaPredicted RBP21.38■■□□□ 1.01
CCM2-216ENST00000488727 MAN1B1Q9UKM7 699 aa21.38■■□□□ 1.01
CCM2-216ENST00000488727 MYH11P35749 1972 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 NPHP3-ACAD11A0A0J9YXS1 232 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 CAND2O75155 1236 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 TIMP1P01033 207 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 CHRNA1P02708 482 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 DNM2P50570 870 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 MRPS6P82932 125 aaKnown RBP21.37■■□□□ 1.01
CCM2-216ENST00000488727 MGAT3Q09327 533 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 RSPH3Q86UC2 560 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 NME8Q8N427 588 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 STAMQ92783 540 aa21.37■■□□□ 1.01
CCM2-216ENST00000488727 SELPP16109 830 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 GUCY2CP25092 1073 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 ARL2P36404 184 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 CCL23P55773 120 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 MAPK7Q13164 816 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 FAM102BQ5T8I3 360 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 IER5Q5VY09 327 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 SV2BQ7L1I2 683 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 LRRC8DQ7L1W4 858 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 KSR1Q8IVT5 923 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 DAW1Q8N136 415 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 TCP11Q8WWU5 503 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 PRPF31Q8WWY3 499 aaKnown RBP21.36■■□□□ 1.01
CCM2-216ENST00000488727 ZNF668Q96K58 619 aaPredicted RBP21.36■■□□□ 1.01
CCM2-216ENST00000488727 OSBPL7Q9BZF2 842 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 XPO4Q9C0E2 1151 aaKnown RBP21.36■■□□□ 1.01
CCM2-216ENST00000488727 POLR3FQ9H1D9 316 aaPredicted RBP21.36■■□□□ 1.01
CCM2-216ENST00000488727 CUEDC2Q9H467 287 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 KBTBD4Q9NVX7 518 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 KCND2Q9NZV8 630 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 PRKAG2Q9UGJ0 569 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 DACH1Q9UI36 760 aa21.36■■□□□ 1.01
CCM2-216ENST00000488727 HIP1RO75146 1068 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 GPR32O75388 356 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 RPLP2P05387 115 aaKnown RBP21.35■■□□□ 1.01
CCM2-216ENST00000488727 RAG1P15918 1043 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 CACNB1Q02641 598 aaPredicted RBP21.35■■□□□ 1.01
CCM2-216ENST00000488727 MORC3Q14149 939 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 MBTPS1Q14703 1052 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 KIZQ2M2Z5 673 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 FAM26DQ5JW98 314 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 RHPN2Q8IUC4 686 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 MLKLQ8NB16 471 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 ASAP3Q8TDY4 903 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 PSPC1Q8WXF1 523 aaKnown RBP21.35■■□□□ 1.01
CCM2-216ENST00000488727 SMARCE1Q969G3 411 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 SCLYQ96I15 445 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 PYM1Q9BRP8 204 aaKnown RBP21.35■■□□□ 1.01
CCM2-216ENST00000488727 CDHR5Q9HBB8 845 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 IFNKQ9P0W0 207 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 CDY2AQ9Y6F7 541 aa21.35■■□□□ 1.01
CCM2-216ENST00000488727 UQCRHLA0A096LP55 91 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms