RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 TMEM117Q9H0C3 514 aa12.35□□□□□ -0.43
LCN2-206ENST00000488391 ELAC1Q9H777 363 aaKnown RBP12.35□□□□□ -0.43
LCN2-206ENST00000488391 SPG21Q9NZD8 308 aa12.35□□□□□ -0.43
LCN2-206ENST00000488391 HCFC2Q9Y5Z7 792 aa12.35□□□□□ -0.43
LCN2-206ENST00000488391 EP300Q09472 2414 aaPredicted RBP12.35□□□□□ -0.43
LCN2-206ENST00000488391 GVINP1Q7Z2Y8 2422 aa12.35□□□□□ -0.43
LCN2-206ENST00000488391 C2orf71A6NGG8 1288 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 H3BQV1 296 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 DDX39AO00148 427 aaKnown RBP12.34□□□□□ -0.43
LCN2-206ENST00000488391 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
LCN2-206ENST00000488391 PI15O43692 258 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 CLASP2O75122 1294 aaKnown RBP12.34□□□□□ -0.43
LCN2-206ENST00000488391 ATG7O95352 703 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 CXCL14O95715 111 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 VTNP04004 478 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 MTHFRP42898 656 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 CLCN5P51795 746 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 CRYBB1P53674 252 aaPredicted RBP12.34□□□□□ -0.43
LCN2-206ENST00000488391 FUT2Q10981 343 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 ITGB3BPQ13352 177 aaPredicted RBP12.34□□□□□ -0.43
LCN2-206ENST00000488391 DSC3Q14574 896 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 NFKBIBQ15653 356 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 FAM43BQ6ZT52 329 aaPredicted RBP12.34□□□□□ -0.43
LCN2-206ENST00000488391 TRMT1LQ7Z2T5 733 aaKnown RBP12.34□□□□□ -0.43
LCN2-206ENST00000488391 ABI1Q8IZP0 508 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 RNF169Q8NCN4 708 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 AGO4Q9HCK5 861 aaKnown RBP12.34□□□□□ -0.43
LCN2-206ENST00000488391 RNF19AQ9NV58 838 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 NFASCO94856 1347 aa12.34□□□□□ -0.43
LCN2-206ENST00000488391 VPS37CA5D8V6 355 aaPredicted RBP12.33□□□□□ -0.44
LCN2-206ENST00000488391 NT5C1B-RDH14C9J2C7 533 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 CCNE2O96020 404 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 PPM1AP35813 382 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 SLC26A2P50443 739 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 AKAP17AQ02040 695 aaKnown RBP12.33□□□□□ -0.44
LCN2-206ENST00000488391 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
LCN2-206ENST00000488391 ZNF484Q5JVG2 852 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 ATAT1Q5SQI0 421 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 FAM160B1Q5W0V3 765 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 MCTP2Q6DN12 878 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 SWSAP1Q6NVH7 229 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 ABHD15Q6UXT9 468 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 HEATR3Q7Z4Q2 680 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 FAM177A1Q8N128 213 aaPredicted RBP12.33□□□□□ -0.44
LCN2-206ENST00000488391 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 TDRD5Q8NAT2 981 aaKnown RBP12.33□□□□□ -0.44
LCN2-206ENST00000488391 FBXO18Q8NFZ0 1043 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 FEZF2Q8TBJ5 459 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 C8orf76Q96K31 380 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 SLC26A6Q9BXS9 759 aa12.33□□□□□ -0.44
LCN2-206ENST00000488391 ZSCAN16Q9H4T2 348 aaPredicted RBP12.33□□□□□ -0.44
LCN2-206ENST00000488391 DBR1Q9UK59 544 aaKnown RBP12.33□□□□□ -0.44
LCN2-206ENST00000488391 IGKV6D-21A0A0A0MT36 114 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 ZBTB42B2RXF5 422 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 GOLGA6L22H0YM25 854 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 HOXA2O43364 376 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 GPR32O75388 356 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 BAG4O95429 457 aaKnown RBP12.32□□□□□ -0.44
LCN2-206ENST00000488391 ATP4AP20648 1035 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 MCM4P33991 863 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 CEP55Q53EZ4 464 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 ECHDC2Q86YB7 292 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 CCDC60Q8IWA6 550 aaPredicted RBP12.32□□□□□ -0.44
LCN2-206ENST00000488391 CKAP2LQ8IYA6 745 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 ZDHHC14Q8IZN3 488 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 SLC39A11Q8N1S5 342 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 PLCD3Q8N3E9 789 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 TMEM87AQ8NBN3 555 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 AUTS2Q8WXX7 1259 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 PHKBQ93100 1093 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 ZNF668Q96K58 619 aaPredicted RBP12.32□□□□□ -0.44
LCN2-206ENST00000488391 ZNF302Q9NR11 478 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 CNTNAP5Q8WYK1 1306 aa12.32□□□□□ -0.44
LCN2-206ENST00000488391 CACNA1AO00555 2505 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 MEIS1O00470 390 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 C22orf31O95567 290 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 EPCAMP16422 314 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 ZSCAN20P17040 1043 aaPredicted RBP12.31□□□□□ -0.44
LCN2-206ENST00000488391 XBP1P17861 261 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 ZNF76P36508 570 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 NLRP11P59045 1033 aaKnown RBP12.31□□□□□ -0.44
LCN2-206ENST00000488391 TRIM29Q14134 588 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 CLLU1OSQ5K130 101 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 CWF19L1Q69YN2 538 aaKnown RBP12.31□□□□□ -0.44
LCN2-206ENST00000488391 LRRC43Q8N309 656 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 KCNG4Q8TDN1 519 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 CYP26B1Q9NR63 512 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 DCHS1Q96JQ0 3298 aa12.31□□□□□ -0.44
LCN2-206ENST00000488391 COL1A2P08123 1366 aa12.3□□□□□ -0.44
LCN2-206ENST00000488391 MYO15AQ9UKN7 3530 aa12.3□□□□□ -0.44
LCN2-206ENST00000488391 NPR3P17342 541 aa12.3□□□□□ -0.44
LCN2-206ENST00000488391 ALDH7A1P49419 539 aaKnown RBP12.3□□□□□ -0.44
LCN2-206ENST00000488391 CLCN3P51790 818 aa12.3□□□□□ -0.44
LCN2-206ENST00000488391 BCAR1P56945 870 aa12.3□□□□□ -0.44
LCN2-206ENST00000488391 RESTQ13127 1097 aa12.3□□□□□ -0.44
LCN2-206ENST00000488391 BMS1Q14692 1282 aaKnown RBP12.3□□□□□ -0.44
LCN2-206ENST00000488391 ANGPT1Q15389 498 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms