RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 ADAM2Q99965 735 aa17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 SLC28A3Q9HAS3 691 aa17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 MORC2Q9Y6X9 1032 aaPredicted RBP17.79■□□□□ 0.44
ERGIC3-216ENST00000488384 UPP2O95045 317 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 EYA4O95677 639 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 SRGAP2CP0DJJ0 459 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 CYP11B2P19099 503 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 SFPQP23246 707 aaKnown RBP eCLIP17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 GLRA2P23416 452 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 LONP1P36776 959 aaKnown RBP17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 CAPSQ13938 189 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 BECN1Q14457 450 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 MXD4Q14582 209 aaPredicted RBP17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 ZRSR1Q15695 479 aaKnown RBP17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 MAEAQ7L5Y9 396 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 CABP7Q86V35 215 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 RNF149Q8NC42 400 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 MINDY3Q9H8M7 445 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 RC3H2Q9HBD1 1191 aaKnown RBP17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 RGS18Q9NS28 235 aa17.78■□□□□ 0.44
ERGIC3-216ENST00000488384 DENND3A2RUS2 1198 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 C9IYK1 514 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 ASAP2O43150 1006 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 SLC26A4O43511 780 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 TAP1Q03518 808 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 GRIN2CQ14957 1233 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 SLC39A14Q15043 492 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 SPRED2Q7Z698 418 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 NPAS4Q8IUM7 802 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 SP7Q8TDD2 431 aaPredicted RBP17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 LRRC15Q8TF66 581 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 PLIN2Q99541 437 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 NT5C3AQ9H0P0 336 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 CSRNP2Q9H175 543 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 C1orf112Q9NSG2 853 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 DNM3Q9UQ16 869 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 SRPRBQ9Y5M8 271 aaKnown RBP17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 CUL9Q8IWT3 2517 aa17.77■□□□□ 0.44
ERGIC3-216ENST00000488384 A0A0C4DFX4 3053 aa17.77■□□□□ 0.43
ERGIC3-216ENST00000488384 LINC01553A4QN01 128 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 UBA7P41226 1012 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 PHKA2P46019 1235 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 SARSP49591 514 aaKnown RBP17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 PTENP60484 403 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 TFDP1Q14186 410 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 FAM102BQ5T8I3 360 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 SRGAP1Q7Z6B7 1085 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 IFNLR1Q8IU57 520 aaPredicted RBP17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 KCTD17Q8N5Z5 321 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 LINC00301Q8NCQ3 95 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 BSNDQ8WZ55 320 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 CDK5RAP3Q96JB5 506 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 ZNF396Q96N95 335 aaPredicted RBP17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 CLIC6Q96NY7 704 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 YME1L1Q96TA2 773 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 RUSC1Q9BVN2 902 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 INO80BQ9C086 356 aaPredicted RBP17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 ZDHHC9Q9Y397 364 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 INSL6Q9Y581 213 aa17.76■□□□□ 0.43
ERGIC3-216ENST00000488384 COL4A4P53420 1690 aaPredicted RBP17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 BRD1O95696 1058 aa17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 POU5F1BQ06416 359 aa17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 FOXD4L6Q3SYB3 417 aaPredicted RBP17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 SPECC1Q5M775 1068 aa17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 FOXD4L3Q6VB84 417 aaPredicted RBP17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 SLC24A5Q71RS6 500 aa17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 CATSPER4Q7RTX7 472 aa17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 NFKBIZQ9BYH8 718 aa17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 AGPAT5Q9NUQ2 364 aa17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 TFIP11Q9UBB9 837 aaKnown RBP17.75■□□□□ 0.43
ERGIC3-216ENST00000488384 ADGRA3Q8IWK6 1321 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 DGKIO75912 1065 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 YEATS4O95619 227 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 PLCG1P19174 1290 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 IBSPP21815 317 aaPredicted RBP17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 MBTD1Q05BQ5 628 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 STK38Q15208 465 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 CDCA2Q69YH5 1023 aaPredicted RBP17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 RINT1Q6NUQ1 792 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 KRI1Q8N9T8 703 aaKnown RBP17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 MAFAQ8NHW3 353 aaPredicted RBP17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 SYMPKQ92797 1274 aaKnown RBP17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 CALML4Q96GE6 196 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 EPSTI1Q96J88 318 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 CCSER1Q9C0I3 900 aa17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 PIN4Q9Y237 131 aaKnown RBP17.74■□□□□ 0.43
ERGIC3-216ENST00000488384 LRRIQ4A6NIV6 560 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 DLL1O00548 723 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 PLA2G4BP0C869 781 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 STAG3L1P0CL83 205 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 ZSCAN20P17040 1043 aaPredicted RBP17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 GATMP50440 423 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 SLC12A3P55017 1021 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 FAM189BP81408 668 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 C1orf186Q6ZWK4 172 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 DAW1Q8N136 415 aa17.73■□□□□ 0.43
ERGIC3-216ENST00000488384 SYT2Q8N9I0 419 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms