RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 CCDC65Q8IXS2 484 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 MORC4Q8TE76 937 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 DDX12PQ92771 950 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 LXNQ9BS40 222 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 SUGCTQ9HAC7 445 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 JPH1Q9HDC5 661 aaPredicted RBP13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 SLC9A2Q9UBY0 812 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 PRKAG3Q9UGI9 489 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 MUTYHQ9UIF7 546 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 MTUS1Q9ULD2 1270 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 ASTN1O14525 1302 aa13.36□□□□□ -0.27
HLA-DOB-209ENST00000488325 SCN5AQ14524 2016 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 RIF1Q5UIP0 2472 aaKnown RBP13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 ATP9AO75110 1047 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 RGS20O76081 388 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 LYPLA2O95372 231 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 PSAPP07602 524 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 CYP11B2P19099 503 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 QARSP47897 775 aaKnown RBP13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 PSMC5P62195 406 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 DYMQ7RTS9 669 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 BMP8AQ7Z5Y6 402 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 ADHFE1Q8IWW8 467 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 ENOX1Q8TC92 643 aaKnown RBP13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 ABHD16BQ9H3Z7 469 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 KCND2Q9NZV8 630 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 PCDHA10Q9Y5I2 948 aa13.35□□□□□ -0.27
HLA-DOB-209ENST00000488325 ARHGEF35A5YM69 484 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 CYP2C9P11712 490 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 IDEP14735 1019 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 PSMC6P62333 389 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 COBLL1Q53SF7 1204 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 HERC4Q5GLZ8 1057 aaPredicted RBP13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 MIS18BP1Q6P0N0 1132 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 BANK1Q8NDB2 785 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 ATP6V0A1Q93050 837 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 FGD4Q96M96 766 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 CCDC43Q96MW1 224 aaKnown RBP13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 BHMT2Q9H2M3 363 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 PANK4Q9NVE7 773 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 DBR1Q9UK59 544 aaKnown RBP13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 FAM50BQ9Y247 325 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 EPG5Q9HCE0 2579 aa13.34□□□□□ -0.27
HLA-DOB-209ENST00000488325 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 PSMA7O14818 248 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 KRT37O76014 449 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 KIF20AO95235 890 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 CCNE2O96020 404 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 PAK1Q13153 545 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 SARM1Q6SZW1 724 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 SUGP1Q8IWZ8 645 aaKnown RBP13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 PBXIP1Q96AQ6 731 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 DNAJC19Q96DA6 116 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 DHTKD1Q96HY7 919 aaPredicted RBP13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 ALG13Q9NP73 1137 aaKnown RBP13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 VTA1Q9NP79 307 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 ANKEF1Q9NU02 776 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 LOXHD1Q8IVV2 1947 aa13.33□□□□□ -0.28
HLA-DOB-209ENST00000488325 MCM3APO60318 1980 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 FAM186AA6NE01 2351 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 BICDL2A1A5D9 508 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 TBCAO75347 108 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 GAP43P17677 238 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 UBA1P22314 1058 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 RFC2P35250 354 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 ACTR2P61160 394 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 ERVK-21P61565 698 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 COASYQ13057 564 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 NCAPHQ15003 741 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 FSCN1Q16658 493 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 TPD52L1Q16890 204 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 FAM26FQ5R3K3 315 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 SPATA1Q5VX52 437 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 KLHL10Q6JEL2 608 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 ARMCX2Q7L311 632 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 OTUD6AQ7L8S5 288 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 TMCO2Q7Z6W1 182 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 ADSSL1Q8N142 457 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 PIGOQ8TEQ8 1089 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 SCFD2Q8WU76 684 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 EDAQ92838 391 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 ATOH1Q92858 354 aaPredicted RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 TGS1Q96RS0 853 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 PPP1R9BQ96SB3 815 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 TIPINQ9BVW5 301 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 TRMT13Q9NUP7 481 aaKnown RBP13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 RWDD2AQ9UIY3 292 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 CTNND2Q9UQB3 1225 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 GDAQ9Y2T3 454 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 COL4A3BPQ9Y5P4 624 aa13.32□□□□□ -0.28
HLA-DOB-209ENST00000488325 PTPRSQ13332 1948 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 KIAA1217Q5T5P2 1943 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 FRMD3A2A2Y4 597 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 TMEM221A6NGB7 291 aa13.31□□□□□ -0.28
HLA-DOB-209ENST00000488325 M0R296 226 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms