RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 OTOGLQ3ZCN5 2332 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 A0A0U1RQF3 1178 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 HIP1O00291 1037 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 N4BP1O75113 896 aaKnown RBP10.53□□□□□ -0.72
COL17A1-207ENST00000488320 GALTP07902 379 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 ADRB1P08588 477 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 EIF4BP23588 611 aaKnown RBP10.53□□□□□ -0.72
COL17A1-207ENST00000488320 ZNF528Q3MIS6 628 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 LONRF3Q496Y0 759 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 EFCAB12Q6NXP0 572 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 MIS18BP1Q6P0N0 1132 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 ABHD15Q6UXT9 468 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 RALYLQ86SE5 291 aaKnown RBP10.53□□□□□ -0.72
COL17A1-207ENST00000488320 TMEM173Q86WV6 379 aaPredicted RBP10.53□□□□□ -0.72
COL17A1-207ENST00000488320 PJA1Q8NG27 643 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 MAP7D2Q96T17 732 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 LZTS2Q9BRK4 669 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 SPZ1Q9BXG8 430 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 PIDD1Q9HB75 910 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 AGO4Q9HCK5 861 aaKnown RBP10.53□□□□□ -0.72
COL17A1-207ENST00000488320 WDR6Q9NNW5 1121 aaKnown RBP10.53□□□□□ -0.72
COL17A1-207ENST00000488320 MAN1C1Q9NR34 630 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 EPS15L1Q9UBC2 864 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 DPP7Q9UHL4 492 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 INPP5FQ9Y2H2 1132 aa10.53□□□□□ -0.72
COL17A1-207ENST00000488320 MYH9P35579 1960 aaKnown RBP10.52□□□□□ -0.72
COL17A1-207ENST00000488320 IGKV6D-21A0A0A0MT36 114 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 C2CD2LO14523 706 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 MAGEB2O15479 319 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 LRRN2O75325 713 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 C22orf31O95567 290 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 CNPP09543 421 aaKnown RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 GLULP15104 373 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 FGFR4P22455 802 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 CLCN3P51790 818 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 ITGB3BPQ13352 177 aaPredicted RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 COL9A3Q14050 684 aaPredicted RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 CCDC60Q8IWA6 550 aaPredicted RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 MAML2Q8IZL2 1156 aaPredicted RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 BBXQ8WY36 941 aaPredicted RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 MYADMQ96S97 322 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 NRDE2Q9H7Z3 1164 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 MRPL17Q9NRX2 175 aaKnown RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 STK39Q9UEW8 545 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 TCEAL9Q9UHQ7 104 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 GMEB2Q9UKD1 530 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 RALYQ9UKM9 306 aaKnown RBP10.52□□□□□ -0.73
COL17A1-207ENST00000488320 FBXO4Q9UKT5 387 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 PCDHGA2Q9Y5H1 932 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 MIA3Q5JRA6 1907 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 CLUHO75153 1309 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 SPTBN2O15020 2390 aa10.52□□□□□ -0.73
COL17A1-207ENST00000488320 ZBTB42B2RXF5 422 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 INPPL1O15357 1258 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 ALDH2P05091 517 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 ATP4AP20648 1035 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 SMARCA1P28370 1054 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 GNAQP50148 359 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 AK2P54819 239 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 STARD6P59095 220 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 SNW1Q13573 536 aaKnown RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 COL9A2Q14055 689 aaPredicted RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 UBXN2BQ14CS0 331 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 CEP55Q53EZ4 464 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 PPM1JQ5JR12 505 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 GLB1LQ6UWU2 654 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 CYP26C1Q6V0L0 522 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 CMTR1Q8N1G2 835 aaKnown RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 ZNF710Q8N1W2 664 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 CMASQ8NFW8 434 aaPredicted RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 NCOA7Q8NI08 942 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 BCL7CQ8WUZ0 217 aaPredicted RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 NLRP7Q8WX94 980 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 SMG7Q92540 1137 aaKnown RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 LPPQ93052 612 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 FAM193BQ96PV7 902 aaPredicted RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 MAP3K14Q99558 947 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 MYL10Q9BUA6 226 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 LNPKQ9C0E8 428 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 ADAMTS10Q9H324 1103 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 CEP131Q9UPN4 1083 aa10.51□□□□□ -0.73
COL17A1-207ENST00000488320 SMG5Q9UPR3 1016 aaKnown RBP10.51□□□□□ -0.73
COL17A1-207ENST00000488320 hCG_1642624A0A1W2PR95 340 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 KANSL1LA0AUZ9 987 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 FAM170BA6NMN3 283 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 TBC1D4O60343 1298 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 CCNE2O96020 404 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 SKIP12755 728 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 LAMP2P13473 410 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 DARSP14868 501 aaKnown RBP10.5□□□□□ -0.73
COL17A1-207ENST00000488320 PHKA2P46019 1235 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 SLC11A1P49279 550 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 DMWDQ09019 674 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 NOMO2Q5JPE7 1267 aa10.5□□□□□ -0.73
COL17A1-207ENST00000488320 TWF2Q6IBS0 349 aaKnown RBP10.5□□□□□ -0.73
COL17A1-207ENST00000488320 NFXL1Q6ZNB6 911 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms