RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 KCNJ14Q9UNX9 436 aa17.21■□□□□ 0.35
TRIM50-203ENST00000488217 A0A087WZ62 844 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 HIDE1A8MVS5 230 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 ALDH7A1P49419 539 aaKnown RBP17.2■□□□□ 0.34
TRIM50-203ENST00000488217 CBX2Q14781 532 aaPredicted RBP17.2■□□□□ 0.34
TRIM50-203ENST00000488217 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 PLPP4Q5VZY2 271 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 ANO5Q75V66 913 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 HELQQ8TDG4 1101 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 MFSD14AQ96MC6 490 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 JPH2Q9BR39 696 aaPredicted RBP17.2■□□□□ 0.34
TRIM50-203ENST00000488217 FDXACB1Q9BRP7 624 aaPredicted RBP17.2■□□□□ 0.34
TRIM50-203ENST00000488217 TRAIPQ9BWF2 469 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 S1PR5Q9H228 398 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 ENTPD7Q9NQZ7 604 aa17.2■□□□□ 0.34
TRIM50-203ENST00000488217 RALGAPA2Q2PPJ7 1873 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 CCDC194A0A1B0GVG4 234 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 EML1O00423 815 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 CDKL5O76039 1030 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 SRGAP2BP0DMP2 458 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 SKIP12755 728 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 ATF7P17544 494 aaPredicted RBP17.19■□□□□ 0.34
TRIM50-203ENST00000488217 PBX3P40426 434 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 TECP42680 631 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 PHKA2P46019 1235 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 QARSP47897 775 aaKnown RBP17.19■□□□□ 0.34
TRIM50-203ENST00000488217 PPP4R3AQ6IN85 833 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 ANKRD54Q6NXT1 300 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 HFE2Q6ZVN8 426 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 ZNF410Q86VK4 478 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 RHPN2Q8IUC4 686 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 KSR1Q8IVT5 923 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 SUSD6Q92537 303 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 RPGRIP1Q96KN7 1286 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 PHF20Q9BVI0 1012 aa17.19■□□□□ 0.34
TRIM50-203ENST00000488217 DKC1O60832 514 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM50-203ENST00000488217 ZNF623O75123 536 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 CXCL14O95715 111 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 HOXB8P17481 243 aaPredicted RBP17.18■□□□□ 0.34
TRIM50-203ENST00000488217 XBP1P17861 261 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 SFPQP23246 707 aaKnown RBP eCLIP17.18■□□□□ 0.34
TRIM50-203ENST00000488217 BCAR1P56945 870 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 SCRN1Q12765 414 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 PPP2R5CQ13362 524 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 BMS1Q14692 1282 aaKnown RBP17.18■□□□□ 0.34
TRIM50-203ENST00000488217 SLC39A11Q8N1S5 342 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 MRPL9Q9BYD2 267 aaKnown RBP17.18■□□□□ 0.34
TRIM50-203ENST00000488217 KCNH6Q9H252 994 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 KCNMB3Q9NPA1 279 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 CYP26B1Q9NR63 512 aa17.18■□□□□ 0.34
TRIM50-203ENST00000488217 NT5C1B-RDH14C9J2C7 533 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 SLC37A4O43826 429 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 MARCH6O60337 910 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 PFKFB2O60825 505 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 P4HBP07237 508 aaKnown RBP17.17■□□□□ 0.34
TRIM50-203ENST00000488217 SMC1AQ14683 1233 aaKnown RBP17.17■□□□□ 0.34
TRIM50-203ENST00000488217 TWF2Q6IBS0 349 aaKnown RBP17.17■□□□□ 0.34
TRIM50-203ENST00000488217 LLGL2Q6P1M3 1020 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 SYCE2Q6PIF2 218 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 TRIM67Q6ZTA4 783 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 BMP8AQ7Z5Y6 402 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 NEK8Q86SG6 692 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 EXOC8Q8IYI6 725 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 RSPH1Q8WYR4 309 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 VAV3Q9UKW4 847 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 TPCN1Q9ULQ1 816 aa17.17■□□□□ 0.34
TRIM50-203ENST00000488217 NLRC5Q86WI3 1866 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 C2orf71A6NGG8 1288 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 TBX3O15119 743 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 CCNT1O60563 726 aaKnown RBP17.16■□□□□ 0.34
TRIM50-203ENST00000488217 GCFC2P16383 781 aaKnown RBP17.16■□□□□ 0.34
TRIM50-203ENST00000488217 NPEPPSP55786 919 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 ZXDAP98168 799 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 EPHA7Q15375 998 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 PLA2G4FQ68DD2 849 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 CATSPER4Q7RTX7 472 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 ZNF579Q8NAF0 562 aaKnown RBP17.16■□□□□ 0.34
TRIM50-203ENST00000488217 PRPF31Q8WWY3 499 aaKnown RBP17.16■□□□□ 0.34
TRIM50-203ENST00000488217 SLC7A3Q8WY07 619 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 LPPQ93052 612 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 CEP170P1Q96L14 293 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 NAP1L4Q99733 375 aaKnown RBP17.16■□□□□ 0.34
TRIM50-203ENST00000488217 IFT122Q9HBG6 1241 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 GJB4Q9NTQ9 266 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 PIN4Q9Y237 131 aaKnown RBP17.16■□□□□ 0.34
TRIM50-203ENST00000488217 PPME1Q9Y570 386 aa17.16■□□□□ 0.34
TRIM50-203ENST00000488217 TRIOO75962 3097 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 OFD1O75665 1012 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 SRGAP2CP0DJJ0 459 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 LONRF3Q496Y0 759 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 GLB1LQ6UWU2 654 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 PIK3AP1Q6ZUJ8 805 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 OTUD6AQ7L8S5 288 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 OXER1Q8TDS5 423 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 HAS1Q92839 578 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 CASP10Q92851 521 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 PBXIP1Q96AQ6 731 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 PGBD4Q96DM1 585 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 TMEM169Q96HH4 297 aa17.15■□□□□ 0.34
TRIM50-203ENST00000488217 FBXL18Q96ME1 805 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms