RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PI4K2BQ8TCG2 481 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 NELL2Q99435 816 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 C16orf70Q9BSU1 422 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 DDX23Q9BUQ8 820 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 LNPKQ9C0E8 428 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 TMEM117Q9H0C3 514 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 NAPBQ9H115 298 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 SMARCAD1Q9H4L7 1026 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 PIF1Q9H611 641 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 EPHX3Q9H6B9 360 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 RAVER2Q9HCJ3 691 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 GPAMQ9HCL2 828 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 TMEM161AQ9NX61 479 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 TMEM63CQ9P1W3 806 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 KANSL3Q9P2N6 904 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 CLIP2Q9UDT6 1046 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 GGT7Q9UJ14 662 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 KCNH3Q9ULD8 1083 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 CEP131Q9UPN4 1083 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 SORCS3Q9UPU3 1222 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 HRH3Q9Y5N1 445 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 WASF2Q9Y6W5 498 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 IGSF9BQ9UPX0 1349 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 SCN5AQ14524 2016 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 TMEM232C9JQI7 657 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 E9PAM4 449 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 STXBP3O00186 592 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 GOLIM4O00461 696 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 DKC1O60832 514 aaKnown RBP eCLIP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 WFS1O76024 890 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 MYL3P08590 195 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 TXNP10599 105 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 AXLP30530 894 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 GNA15P30679 374 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 RPS9P46781 194 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 TDO2P48775 406 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 MRPS6P82932 125 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 SETQ01105 290 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 SMC1AQ14683 1233 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 C11orf91Q3C1V1 193 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 MCMDC2Q4G0Z9 681 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 C6orf118Q5T5N4 469 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 WDR78Q5VTH9 848 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 GDF6Q6KF10 455 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 CXCL17Q6UXB2 119 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 LRRC69Q6ZNQ3 347 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 KIAA1211Q6ZU35 1233 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 KRT25Q7Z3Z0 450 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 CCDC84Q86UT8 332 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 IQCA1Q86XH1 822 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 LINC01465Q8N7H1 131 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 AFG1LQ8WV93 481 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 MRPS27Q92552 414 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 DNASE1L2Q92874 299 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 SECISBP2LQ93073 1101 aaKnown RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 E2F7Q96AV8 911 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 DMRTB1Q96MA1 342 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 PDCD2LQ9BRP1 358 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 PI4K2AQ9BTU6 479 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 TRPV6Q9H1D0 765 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 ADAM7Q9H2U9 754 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 ERVK-5Q9HDB9 667 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 FNIP2Q9P278 1114 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 DUSP12Q9UNI6 340 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 RIPK3Q9Y572 518 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 PCDHGA2Q9Y5H1 932 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 UBIAD1Q9Y5Z9 338 aa3.13□□□□□ -1.91
DEPDC1-203ENST00000488146 MCM3APO60318 1980 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 CCDC163A0A0D9SF12 145 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 UPK3BL1B0FP48 263 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 UPK3BL2E5RIL1 263 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 CDK2AP1O14519 115 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ZBTB5O15062 677 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 PGK2P07205 417 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 GRNP28799 593 aaKnown RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 IDH3AP50213 366 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 TFAP4Q01664 338 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 LMNB2Q03252 620 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 POU4F2Q12837 409 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 TCF15Q12870 199 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 PAK2Q13177 524 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ORC2Q13416 577 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 BAATQ14032 418 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 RTN1Q16799 776 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 FBXO47Q5MNV8 452 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 PRAMEF19Q5SWL8 479 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 FAM160B1Q5W0V3 765 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ZNF410Q86VK4 478 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 SMAP1Q8IYB5 467 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 LRRC43Q8N309 656 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 MIGA1Q8NAN2 632 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 LEMD2Q8NC56 503 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 SLC22A17Q8WUG5 538 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 SHDQ96IW2 340 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 MBOAT7Q96N66 472 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 SFXN1Q9H9B4 322 aa3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 PRMT8Q9NR22 394 aaPredicted RBP3.12□□□□□ -1.91
DEPDC1-203ENST00000488146 ZDHHC7Q9NXF8 308 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms